The 2.0 version of rSNPBase

Variant report

Variant rs10472092
Chromosome Location chr5:58312606-58312607
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:58279200-58314000 Weak transcription Primary B cells from cord blood blood
2 chr5:58279400-58317600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:58279600-58330400 Weak transcription Fetal Stomach stomach
4 chr5:58281800-58321600 Weak transcription Osteobl bone
5 chr5:58286200-58312800 Weak transcription Lung lung
6 chr5:58286200-58316200 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr5:58286200-58330400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr5:58286200-58330600 Weak transcription Thymus Thymus
9 chr5:58286800-58312800 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr5:58288800-58330600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr5:58296000-58321600 Weak transcription Aorta Aorta
12 chr5:58298600-58317800 Weak transcription Stomach Smooth Muscle stomach
13 chr5:58299600-58316600 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr5:58299800-58318000 Weak transcription Right Ventricle heart
15 chr5:58301200-58313000 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr5:58302000-58312800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr5:58302000-58315200 Weak transcription Psoas Muscle Psoas
18 chr5:58302400-58312800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr5:58302400-58316200 Weak transcription Placenta Amnion Placenta Amnion
20 chr5:58302400-58321600 Weak transcription Gastric stomach
21 chr5:58302800-58312800 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr5:58302800-58315200 Weak transcription Colon Smooth Muscle Colon
23 chr5:58303600-58317800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr5:58304000-58316800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr5:58304000-58316800 Weak transcription Rectal Smooth Muscle rectum
26 chr5:58305400-58313000 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr5:58305800-58315400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr5:58306000-58312800 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr5:58307000-58312800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr5:58307000-58312800 Weak transcription Fetal Muscle Leg muscle
31 chr5:58307000-58322000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr5:58309000-58314200 Weak transcription Fetal Heart heart
33 chr5:58310800-58323400 Weak transcription Fetal Muscle Trunk muscle
34 chr5:58311800-58314600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr5:58312000-58315000 Genic enhancers A549 lung
36 chr5:58312200-58314000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr5:58312200-58314200 Strong transcription Primary T cells fromperipheralblood blood
38 chr5:58312200-58314200 Strong transcription Primary T helper naive cells fromperipheralblood blood
39 chr5:58312200-58315400 Strong transcription Primary T helper cells fromperipheralblood blood
40 chr5:58312400-58314200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr5:58312400-58314800 Strong transcription Primary T cells from cord blood blood
42 chr5:58312400-58315600 Strong transcription Hela-S3 cervix
43 chr5:58312400-58316000 Strong transcription HSMM muscle
44 chr5:58312600-58313200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
45 chr5:58312600-58313200 Strong transcription Fetal Lung lung
46 chr5:58312600-58313400 ZNF genes & repeats Primary hematopoietic stem cells blood
47 chr5:58312600-58313400 Strong transcription Fetal Thymus thymus
48 chr5:58312600-58313800 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr5:58312600-58315200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
50 chr5:58312600-58316600 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015