The 2.0 version of rSNPBase

Variant report

Variant rs10068715
Chromosome Location chr5:58316334-58316335
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:58279400-58317600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr5:58279600-58330400 Weak transcription Fetal Stomach stomach
3 chr5:58281800-58321600 Weak transcription Osteobl bone
4 chr5:58286200-58330400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr5:58286200-58330600 Weak transcription Thymus Thymus
6 chr5:58288800-58330600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr5:58296000-58321600 Weak transcription Aorta Aorta
8 chr5:58298600-58317800 Weak transcription Stomach Smooth Muscle stomach
9 chr5:58299600-58316600 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr5:58299800-58318000 Weak transcription Right Ventricle heart
11 chr5:58302400-58321600 Weak transcription Gastric stomach
12 chr5:58303600-58317800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr5:58304000-58316800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr5:58304000-58316800 Weak transcription Rectal Smooth Muscle rectum
15 chr5:58307000-58322000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr5:58310800-58323400 Weak transcription Fetal Muscle Trunk muscle
17 chr5:58312600-58316600 Weak transcription Duodenum Mucosa Duodenum
18 chr5:58313000-58317600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr5:58313000-58333400 Weak transcription Lung lung
20 chr5:58313200-58316600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr5:58313200-58316800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr5:58313200-58325600 Weak transcription Fetal Lung lung
23 chr5:58313200-58330200 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr5:58313400-58316400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr5:58313800-58317800 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr5:58314000-58316600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr5:58314000-58316800 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr5:58314000-58318600 Strong transcription Fetal Thymus thymus
29 chr5:58314200-58316600 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr5:58314200-58318000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr5:58314200-58318400 Enhancers Fetal Heart heart
32 chr5:58314400-58323200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr5:58314600-58316600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr5:58314600-58321600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr5:58314800-58318600 Enhancers Skeletal Muscle Female skeletal muscle
36 chr5:58314800-58323000 Weak transcription Primary hematopoietic stem cells blood
37 chr5:58315000-58325800 Weak transcription Fetal Muscle Leg muscle
38 chr5:58315200-58318600 Genic enhancers Primary T cells from cord blood blood
39 chr5:58315400-58316600 Genic enhancers A549 lung
40 chr5:58315400-58317800 Enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr5:58315400-58318600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr5:58315600-58316600 Weak transcription Psoas Muscle Psoas
43 chr5:58315600-58316600 Weak transcription Hela-S3 cervix
44 chr5:58315600-58316800 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr5:58315600-58316800 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr5:58315600-58317600 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr5:58315600-58318000 Weak transcription Left Ventricle heart
48 chr5:58315800-58316800 Enhancers Primary T helper cells PMA-I stimulated --
49 chr5:58316000-58316400 Weak transcription Colon Smooth Muscle Colon
50 chr5:58316000-58316400 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015