Variant report

Variant	rs10076684
Chromosome Location	chr5:150935978-150935979
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:150933361..150936096-chr5:150939863..150943066,3	K562	blood:
2	chr5:150929715..150931256-chr5:150934552..150937035,2	MCF-7	breast:
3	chr5:150933953..150936226-chr5:150941566..150943074,2	K562	blood:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10044879	0.83[AMR][1000 genomes]
rs10058833	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10059380	0.86[EUR][1000 genomes]
rs10064935	0.86[EUR][1000 genomes]
rs10476989	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2304023	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28393159	0.91[AMR][1000 genomes]
rs28406331	1.00[AMR][1000 genomes]
rs28502007	1.00[AMR][1000 genomes]
rs28506125	1.00[AMR][1000 genomes]
rs28556596	0.83[AMR][1000 genomes]
rs28605719	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs28612803	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28736662	0.83[AMR][1000 genomes]
rs56838504	1.00[AMR][1000 genomes]
rs58108509	1.00[AMR][1000 genomes]
rs58297526	0.83[AMR][1000 genomes]
rs58395047	0.86[EUR][1000 genomes]
rs59016671	0.83[AMR][1000 genomes]
rs59412412	1.00[AMR][1000 genomes]
rs60163825	1.00[AMR][1000 genomes]
rs60673682	1.00[AMR][1000 genomes]
rs6860179	1.00[AMR][1000 genomes]
rs6860376	1.00[AMR][1000 genomes]
rs6860421	1.00[AMR][1000 genomes]
rs6881602	1.00[AMR][1000 genomes]
rs6883760	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7710247	0.89[AFR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:150908200-150948000	Strong transcription	HMEC	breast
2	chr5:150908400-150944000	Strong transcription	NHEK	skin
3	chr5:150909200-150942400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr5:150911600-150942800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr5:150914200-150938600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr5:150918200-150945400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr5:150931000-150942800	Weak transcription	Brain Angular Gyrus	brain
8	chr5:150933400-150936000	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr5:150934200-150949600	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr5:150934600-150936200	Weak transcription	Adipose Nuclei	Adipose
11	chr5:150934600-150937000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr5:150935200-150936600	Strong transcription	Esophagus	oesophagus
13	chr5:150935400-150936600	Strong transcription	Skeletal Muscle Female	skeletal muscle
14	chr5:150935400-150937400	Enhancers	Primary B cells from peripheral blood	blood
15	chr5:150935400-150938800	Enhancers	Primary monocytes fromperipheralblood	blood
16	chr5:150935600-150936000	Enhancers	Spleen	Spleen
17	chr5:150935600-150936000	Enhancers	K562	blood
18	chr5:150935600-150936000	Enhancers	Monocytes-CD14+_RO01746	blood
19	chr5:150935600-150937600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr5:150935600-150939400	Enhancers	Placenta	Placenta
21	chr5:150935800-150937000	Enhancers	Primary B cells from cord blood	blood
22	chr5:150935800-150937000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

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