Variant report

Variant rs10080567
Chromosome Location chr6:27363058-27363059
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:27357200-27366600 Weak transcription Left Ventricle heart
2 chr6:27357400-27364200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:27357400-27364800 Weak transcription Fetal Muscle Leg muscle
4 chr6:27357400-27364800 Weak transcription Rectal Smooth Muscle rectum
5 chr6:27357400-27365000 Weak transcription Fetal Lung lung
6 chr6:27357400-27366000 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr6:27357400-27367000 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr6:27357400-27367200 Weak transcription Brain Substantia Nigra brain
9 chr6:27357400-27367800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr6:27357400-27368000 Weak transcription Fetal Kidney kidney
11 chr6:27357600-27365000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr6:27357600-27365000 Weak transcription Fetal Muscle Trunk muscle
13 chr6:27357600-27365800 Weak transcription Stomach Smooth Muscle stomach
14 chr6:27357600-27367000 Weak transcription Fetal Brain Male brain
15 chr6:27357600-27368000 Weak transcription Brain Angular Gyrus brain
16 chr6:27357600-27368600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr6:27357600-27368800 Weak transcription Pancreas Pancrea
18 chr6:27357800-27366800 Weak transcription Brain Anterior Caudate brain
19 chr6:27357800-27367000 Weak transcription Spleen Spleen
20 chr6:27357800-27367200 Weak transcription Brain Cingulate Gyrus brain
21 chr6:27358000-27365000 Weak transcription Brain Inferior Temporal Lobe brain
22 chr6:27358000-27367000 Weak transcription Brain Hippocampus Middle brain
23 chr6:27358000-27368200 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr6:27359600-27371200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr6:27359600-27372200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr6:27360000-27371400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
27 chr6:27360600-27370800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:27362000-27363200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr6:27362000-27363400 ZNF genes & repeats Fetal Stomach stomach
30 chr6:27362400-27363400 ZNF genes & repeats H1 Cell Line embryonic stem cell
31 chr6:27362400-27365000 Weak transcription Adipose Nuclei Adipose
32 chr6:27362600-27363400 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
33 chr6:27362800-27367800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr6:27362800-27368400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr6:27362800-27368800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr6:27363000-27363200 ZNF genes & repeats H9 Cell Line embryonic stem cell
37 chr6:27363000-27363200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
38 chr6:27363000-27363200 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
39 chr6:27363000-27363200 ZNF genes & repeats Aorta Aorta
40 chr6:27363000-27363200 ZNF genes & repeats Right Atrium heart
41 chr6:27363000-27363200 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
42 chr6:27363000-27363400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
43 chr6:27363000-27363400 ZNF genes & repeats Primary B cells from cord blood blood
44 chr6:27363000-27363400 ZNF genes & repeats Ovary ovary
45 chr6:27363000-27363800 ZNF genes & repeats Primary hematopoietic stem cells blood
46 chr6:27363000-27365200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:27363000-27367000 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr6:27363000-27372200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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