Variant report

Variant	rs2223464
Chromosome Location	chr6:27356216-27356217
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TAF1	chr6:27356096-27357080	H1-hESC	embryonic stem cell:	n/a	n/a
2	TAF1	chr6:27356205-27356945	K562	blood:	n/a	n/a
3	HCFC1	chr6:27355949-27357120	Hela-S3	cervix:	n/a	n/a
4	ZBTB7A	chr6:27356140-27357034	K562	blood:	n/a	n/a
5	SIN3A	chr6:27356193-27357095	H1-hESC	embryonic stem cell:	n/a	n/a
6	MAX	chr6:27355707-27357130	NB4	blood:	n/a	chr6:27356374-27356384 chr6:27356973-27356982
7	MYC	chr6:27356113-27357175	NB4	blood:	n/a	chr6:27356374-27356384 chr6:27356973-27356982
8	NRF1	chr6:27356070-27357403	SK-N-SH	brain:	n/a	chr6:27356879-27356886 chr6:27356491-27356505 chr6:27356491-27356502 chr6:27356490-27356501
9	TAF1	chr6:27356078-27356992	H1-neurons	neurons:	n/a	n/a
10	CEBPB	chr6:27355943-27356733	K562	blood:	n/a	chr6:27356124-27356135 chr6:27356433-27356444 chr6:27355981-27355990 chr6:27356126-27356135
11	CEBPB	chr6:27355966-27356808	Hela-S3	cervix:	n/a	chr6:27356124-27356135 chr6:27356433-27356444 chr6:27355981-27355990 chr6:27356126-27356135
12	CEBPB	chr6:27355931-27356309	MCF-7	breast:	n/a	chr6:27356124-27356135 chr6:27355981-27355990 chr6:27356126-27356135
13	CEBPB	chr6:27355900-27356769	HepG2	liver:	n/a	chr6:27356124-27356135 chr6:27356433-27356444 chr6:27355981-27355990 chr6:27356126-27356135
14	STAT5A	chr6:27356138-27357057	GM12878	blood:	n/a	n/a
15	MAX	chr6:27356168-27356973	SK-N-SH	brain:	n/a	chr6:27356374-27356384
16	KAP1	chr6:27356207-27357303	HEK293	kidney:	n/a	n/a
17	POLR2A	chr6:27356035-27357100	SK-N-MC	brain:	n/a	n/a
18	POLR2A	chr6:27356169-27357064	NB4	blood:	n/a	n/a
19	CEBPB	chr6:27355921-27357031	A549	lung:	n/a	chr6:27356124-27356135 chr6:27356433-27356444 chr6:27355981-27355990 chr6:27356126-27356135
20	SP4	chr6:27356158-27356933	H1-hESC	embryonic stem cell:	n/a	n/a
21	CEBPB	chr6:27355860-27356747	IMR90	lung:	n/a	chr6:27356124-27356135 chr6:27356433-27356444 chr6:27355981-27355990 chr6:27356126-27356135
22	RCOR1	chr6:27356127-27356926	K562	blood:	n/a	n/a
23	CEBPB	chr6:27356207-27357014	GM12878	blood:	n/a	chr6:27356433-27356444
24	JUND	chr6:27356033-27356836	H1-hESC	embryonic stem cell:	n/a	n/a
25	TEAD4	chr6:27356121-27356806	HepG2	liver:	n/a	n/a
26	PML	chr6:27356192-27357166	GM12878	blood:	n/a	n/a
27	POLR2A	chr6:27356213-27357029	ECC-1	luminal epithelium:	n/a	n/a
28	PML	chr6:27356132-27357050	K562	blood:	n/a	n/a
29	CCNT2	chr6:27356216-27357079	K562	blood:	n/a	chr6:27356422-27356431
30	TEAD4	chr6:27356117-27356869	H1-hESC	embryonic stem cell:	n/a	n/a
31	MTA3	chr6:27356201-27357192	GM12878	blood:	n/a	n/a
32	POLR2A	chr6:27356207-27357148	GM12892	blood:	n/a	n/a
33	MYC	chr6:27356096-27357188	K562	blood:	n/a	chr6:27356374-27356384 chr6:27356973-27356982
34	CEBPB	chr6:27355968-27356744	A549	lung:	n/a	chr6:27356124-27356135 chr6:27356433-27356444 chr6:27355981-27355990 chr6:27356126-27356135
35	KAP1	chr6:27356106-27356919	U2OS	brain:	n/a	n/a
36	POLR2A	chr6:27356158-27357009	SK-N-SH	brain:	n/a	n/a
37	ZBTB7A	chr6:27355986-27357167	ECC-1	luminal epithelium:	n/a	n/a
38	CEBPB	chr6:27355805-27356909	ECC-1	luminal epithelium:	n/a	chr6:27356124-27356135 chr6:27356433-27356444 chr6:27355981-27355990 chr6:27356126-27356135
39	RAD21	chr6:27356118-27356928	H1-hESC	embryonic stem cell:	n/a	chr6:27356420-27356430
40	TCF12	chr6:27356194-27357147	ECC-1	luminal epithelium:	n/a	chr6:27357106-27357116
41	TCF12	chr6:27356182-27357015	A549	lung:	n/a	n/a
42	POLR2A	chr6:27356157-27357036	PFSK-1	brain:	n/a	n/a
43	CEBPB	chr6:27355927-27356905	K562	blood:	n/a	chr6:27356124-27356135 chr6:27356433-27356444 chr6:27355981-27355990 chr6:27356126-27356135
44	CREB1	chr6:27356195-27357021	H1-hESC	embryonic stem cell:	n/a	n/a
45	TEAD4	chr6:27356186-27356961	H1-hESC	embryonic stem cell:	n/a	n/a
46	POLR2A	chr6:27356137-27357122	PFSK-1	brain:	n/a	n/a
47	POLR2A	chr6:27356027-27357237	H1-hESC	embryonic stem cell:	n/a	n/a
48	MAX	chr6:27356198-27357217	HepG2	liver:	n/a	chr6:27356374-27356384 chr6:27356973-27356982
49	POLR2A	chr6:27356186-27357143	HL-60	blood:	n/a	n/a
50	POLR2A	chr6:27356213-27357138	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:27354651..27357206-chr6:27439212..27442131,3	K562	blood:
2	chr6:27341304..27343058-chr6:27356076..27357820,2	MCF-7	breast:
3	chr21:27542816..27543374-chr6:27355736..27356540,2	HCT-116	colon:
4	chr6:27342371..27343890-chr6:27355850..27358027,2	K562	blood:
5	chr6:27291445..27294642-chr6:27355178..27358043,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF184-3	chr6:27356046-27357004	NONHSAT108378

Variant related genes	Relation type
ZNF391	TF binding region
ENSG00000273492	Chromatin interaction
ENSG00000220758	Chromatin interaction
ENSG00000124613	Chromatin interaction
ENSG00000142192	Chromatin interaction
ENSG00000096654	Chromatin interaction

Extended variants
information (count: 238 )
Associated
traits (count: 20 )

rSNPs within LD-proxies of this variant (count:233)

rs_ID	r²[population]
rs10080555	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10080558	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10080567	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10080569	0.92[CEU][hapmap];0.94[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10080571	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10080814	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1014227	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs1022515	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1022517	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1022518	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10484396	0.92[ASN][1000 genomes]
rs10484397	0.90[ASN][1000 genomes]
rs10484398	0.95[CHB][hapmap];0.89[JPT][hapmap]
rs10755644	0.87[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.84[TSI][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10807020	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10807021	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10807022	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10807023	0.90[ASN][1000 genomes]
rs10807024	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs10807025	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs10946913	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10946914	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10946916	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10946917	0.92[ASN][1000 genomes]
rs10946918	0.94[ASN][1000 genomes]
rs10946919	0.81[ASN][1000 genomes]
rs10946920	1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs10946921	1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs10946931	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs10946932	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs10946933	0.83[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs11966173	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11968825	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12195788	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12197858	0.90[ASN][1000 genomes]
rs12199110	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs12200018	0.90[ASN][1000 genomes]
rs12205189	0.94[ASN][1000 genomes]
rs12212288	0.94[ASN][1000 genomes]
rs12212293	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12213598	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs12525255	0.96[ASN][1000 genomes]
rs12525266	0.94[ASN][1000 genomes]
rs12525544	0.94[ASN][1000 genomes]
rs12528904	0.94[ASN][1000 genomes]
rs12529840	0.92[ASN][1000 genomes]
rs12662076	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs13201443	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs13201965	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs13201985	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs13207099	0.94[ASN][1000 genomes]
rs13215216	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13217798	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13220155	0.83[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs1534936	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1534937	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1569566	0.90[ASN][1000 genomes]
rs1883216	1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs1883402	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1883404	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1883405	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1963145	0.84[AMR][1000 genomes]
rs1985818	0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1987278	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1989298	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1989299	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2015648	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2049945	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs2064219	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2076305	1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.81[TSI][hapmap];0.96[ASN][1000 genomes]
rs2092121	1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs2092122	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs2142705	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs2143059	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2143060	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2143061	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2143062	0.94[CEU][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[TSI][hapmap];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2143063	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2179154	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2179362	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2206250	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2206251	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2206252	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2206253	0.92[ASN][1000 genomes]
rs2206254	0.90[ASN][1000 genomes]
rs2223463	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2235252	1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs2235254	1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs2272814	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs2294308	1.00[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap]
rs2294309	1.00[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap]
rs2393927	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2393928	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2393929	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2393930	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2393931	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2393932	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2893916	0.92[ASN][1000 genomes]
rs2893917	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs34185469	0.94[ASN][1000 genomes]
rs3734574	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3734575	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3918438	0.88[ASN][1000 genomes]
rs4128497	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4305708	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4339442	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4358616	1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs4455661	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4478400	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs4504471	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4516940	0.96[ASN][1000 genomes]
rs4562132	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4579353	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4711147	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4711148	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4711150	0.94[ASN][1000 genomes]
rs4711151	0.95[ASN][1000 genomes]
rs4711153	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs4713084	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4713085	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4713086	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.93[TSI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4713088	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4713089	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4713090	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4713092	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4713093	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4713094	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4713096	0.93[ASN][1000 genomes]
rs4713097	0.96[ASN][1000 genomes]
rs4713101	0.86[ASN][1000 genomes]
rs4713105	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs4713106	0.94[CEU][hapmap];0.91[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap]
rs55705181	0.88[ASN][1000 genomes]
rs57125518	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs57647048	0.90[ASN][1000 genomes]
rs62401131	0.90[ASN][1000 genomes]
rs62401133	0.86[ASN][1000 genomes]
rs6456774	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6456775	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6456776	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6456777	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6456778	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6456779	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6456781	0.94[CEU][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.80[MEX][hapmap];0.85[YRI][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6456784	0.94[ASN][1000 genomes]
rs6456785	1.00[CHB][hapmap];0.98[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs6456788	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs6456790	0.87[CEU][hapmap]
rs6650992	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs6899780	0.90[ASN][1000 genomes]
rs6899950	1.00[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap]
rs6900278	0.84[ASN][1000 genomes]
rs6901629	0.95[ASN][1000 genomes]
rs6903254	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6904883	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6908086	0.90[ASN][1000 genomes]
rs6908553	0.96[ASN][1000 genomes]
rs6912091	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6913122	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6914542	0.90[ASN][1000 genomes]
rs6914585	0.90[ASN][1000 genomes]
rs6915934	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6920010	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs6920362	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6920408	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs6920733	0.94[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs6921071	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs6923108	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6923539	0.83[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6925606	0.94[ASN][1000 genomes]
rs6926142	0.92[ASN][1000 genomes]
rs6928314	0.94[ASN][1000 genomes]
rs6929812	1.00[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs6934748	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6934933	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6934985	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6935116	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6935118	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6936356	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6936539	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6936951	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6938943	1.00[CHB][hapmap];0.98[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs726830	0.90[CHB][hapmap];0.95[JPT][hapmap]
rs7509	0.86[CHB][hapmap];0.95[JPT][hapmap]
rs760880	0.90[ASN][1000 genomes]
rs764460	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs766092	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7738512	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7741031	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap]
rs7744110	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs7745380	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7747283	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7747444	0.92[ASN][1000 genomes]
rs7748366	1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs7750795	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap]
rs7754086	0.94[ASN][1000 genomes]
rs7754411	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7754678	1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs7754724	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs7754977	0.89[ASW][hapmap];0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.95[JPT][hapmap];0.90[MEX][hapmap];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7759001	0.94[CEU][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[TSI][hapmap];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7761989	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs7771598	0.94[ASN][1000 genomes]
rs7772160	1.00[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs7774613	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs9348765	0.82[JPT][hapmap]
rs9357035	0.88[ASN][1000 genomes]
rs9357037	0.94[CEU][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.81[TSI][hapmap];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9368503	0.81[JPT][hapmap]
rs9368504	0.88[ASN][1000 genomes]
rs9368505	0.90[ASN][1000 genomes]
rs9368508	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9461375	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9461378	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9461379	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9461380	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9468079	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9468100	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9468101	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9468111	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9468112	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9468114	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9468115	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9468117	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9468121	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9468141	1.00[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap]
rs979352	0.90[ASN][1000 genomes]
rs979353	0.90[ASN][1000 genomes]
rs980960	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs980961	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs980962	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs980963	1.00[CEU][hapmap];0.85[YRI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9969094	0.82[LWK][hapmap];0.89[MKK][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948921	chr6:26556890-27443957	Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	472 gene(s)	inside rSNPs	diseases
2	nsv1017328	chr6:27177147-27369588	Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
3	esv3439048	chr6:27351973-27357171	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	n/a
4	nsv1031803	chr6:27355881-27423655	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
5	nsv538166	chr6:27355881-27423655	Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

mRNA abundance (count:20)

SNP	Gene	Cis/trans	Tissue	Source
rs2223464	ZNF391	cis	Whole Blood	GTEx
rs2223464	GMNN	cis	cerebellum	SCAN
rs2223464	ZNF391	cis	cerebellum	SCAN
rs2223464	ZNF391	cis	Esophagus Mucosa	GTEx
rs2223464	ZNF391	cis	Adipose Subcutaneous	GTEx
rs2223464	ZNF391	cis	Heart Left Ventricle	GTEx
rs2223464	ZNF391	cis	Skin Sun Exposed Lower leg	GTEx
rs2223464	ZNF391	Cis_1M	lymphoblastoid	RTeQTL
rs2223464	HIST1H2AB	cis	parietal	SCAN
rs2223464	ZNF391	cis	Artery Aorta	GTEx
rs2223464	ZSCAN23	cis	cerebellum	SCAN
rs2223464	ZNF391	cis	lung	GTEx
rs2223464	ZNF391	cis	Nerve Tibial	GTEx
rs2223464	ZNF391	cis	Artery Tibial	GTEx
rs2223464	ZNF391	cis	Thyroid	GTEx
rs2223464	ZNF391	cis	parietal	SCAN
rs2223464	ZNF391	cis	Muscle Skeletal	GTEx
rs2223464	HIST1H4G	cis	cerebellum	SCAN
rs2223464	ZNF391	cis	lymphoblastoid	seeQTL
rs2223464	ZNF391	cis	Esophagus Muscularis	GTEx

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:27355000-27357400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:27355600-27357600	Active TSS	iPS-18 Cell Line	embryonic stem cell
3	chr6:27355600-27358400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr6:27355800-27356400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:27355800-27356400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr6:27355800-27356400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr6:27355800-27356400	Flanking Active TSS	Fetal Muscle Leg	muscle
8	chr6:27355800-27356400	Flanking Active TSS	Dnd41	blood
9	chr6:27355800-27356600	Active TSS	Fetal Muscle Trunk	muscle
10	chr6:27355800-27356800	Active TSS	Colonic Mucosa	Colon
11	chr6:27355800-27357000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:27355800-27357000	Active TSS	Brain Angular Gyrus	brain
13	chr6:27355800-27357000	Active TSS	HMEC	breast
14	chr6:27355800-27357200	Active TSS	Muscle Satellite Cultured Cells	--
15	chr6:27355800-27357200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr6:27355800-27357200	Active TSS	Aorta	Aorta
17	chr6:27355800-27357200	Active TSS	Brain Hippocampus Middle	brain
18	chr6:27355800-27357200	Active TSS	Fetal Brain Male	brain
19	chr6:27355800-27357200	Active TSS	Right Ventricle	heart
20	chr6:27355800-27357200	Active TSS	A549	lung
21	chr6:27355800-27357200	Flanking Active TSS	HUVEC	blood vessel
22	chr6:27355800-27357200	Active TSS	K562	blood
23	chr6:27355800-27357200	Active TSS	NHDF-Ad	bronchial
24	chr6:27355800-27357400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
25	chr6:27355800-27357400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr6:27355800-27357400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr6:27355800-27357400	Active TSS	Brain Cingulate Gyrus	brain
28	chr6:27355800-27357400	Active TSS	Fetal Brain Female	brain
29	chr6:27355800-27357400	Active TSS	Fetal Intestine Small	intestine
30	chr6:27355800-27357400	Active TSS	Rectal Smooth Muscle	rectum
31	chr6:27355800-27357400	Active TSS	NHLF	lung
32	chr6:27355800-27357600	Active TSS	H9 Cell Line	embryonic stem cell
33	chr6:27355800-27357600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr6:27355800-27357600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr6:27355800-27357600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr6:27355800-27357600	Active TSS	Skeletal Muscle Male	skeletal muscle
37	chr6:27355800-27357600	Active TSS	Stomach Smooth Muscle	stomach
38	chr6:27355800-27357600	Active TSS	NHEK	skin
39	chr6:27355800-27357800	Active TSS	ES-I3 Cell Line	embryonic stem cell
40	chr6:27355800-27357800	Active TSS	H1 Cell Line	embryonic stem cell
41	chr6:27355800-27357800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
42	chr6:27355800-27357800	Active TSS	GM12878-XiMat	blood
43	chr6:27355800-27358000	Active TSS	HUES48 Cell Line	embryonic stem cell
44	chr6:27355800-27358000	Active TSS	HUES6 Cell Line	embryonic stem cell
45	chr6:27356000-27356400	Flanking Bivalent TSS/Enh	Primary neutrophils fromperipheralblood	blood
46	chr6:27356000-27356400	Flanking Active TSS	Primary B cells from peripheral blood	blood
47	chr6:27356000-27356400	Flanking Active TSS	Primary T cells fromperipheralblood	blood
48	chr6:27356000-27356400	Flanking Active TSS	Primary hematopoietic stem cells	blood
49	chr6:27356000-27356400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
50	chr6:27356000-27356400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood

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