Variant report

Variant rs13201985
Chromosome Location chr6:27433633-27433634
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:27412600-27438000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr6:27415400-27438600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr6:27415800-27434000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
4 chr6:27424000-27439800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr6:27425000-27438800 Weak transcription Colon Smooth Muscle Colon
6 chr6:27425200-27433800 Weak transcription Psoas Muscle Psoas
7 chr6:27425200-27435000 Weak transcription Right Ventricle heart
8 chr6:27425400-27435200 Weak transcription Brain Substantia Nigra brain
9 chr6:27425400-27438400 Weak transcription Fetal Brain Male brain
10 chr6:27425600-27439400 Weak transcription H9 Cell Line embryonic stem cell
11 chr6:27426400-27438200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
12 chr6:27426600-27438200 Strong transcription Fetal Thymus thymus
13 chr6:27427800-27440000 Weak transcription Esophagus oesophagus
14 chr6:27428400-27434800 Weak transcription HUVEC blood vessel
15 chr6:27428400-27438800 Weak transcription Brain Inferior Temporal Lobe brain
16 chr6:27428800-27434800 Weak transcription Gastric stomach
17 chr6:27428800-27437800 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr6:27428800-27439800 Weak transcription Pancreas Pancrea
19 chr6:27429000-27433800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr6:27429000-27433800 Weak transcription Rectal Smooth Muscle rectum
21 chr6:27429000-27434600 Weak transcription NHEK skin
22 chr6:27429000-27435000 Weak transcription Aorta Aorta
23 chr6:27429000-27435200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr6:27429200-27435000 Strong transcription Thymus Thymus
25 chr6:27429200-27437400 Weak transcription Small Intestine intestine
26 chr6:27429400-27434400 Weak transcription H1 Cell Line embryonic stem cell
27 chr6:27429400-27434800 Weak transcription Spleen Spleen
28 chr6:27429400-27437200 Strong transcription Rectal Mucosa Donor 31 rectum
29 chr6:27429400-27439000 Weak transcription Stomach Mucosa stomach
30 chr6:27429600-27434800 Weak transcription Ovary ovary
31 chr6:27429600-27435000 Weak transcription Lung lung
32 chr6:27429600-27437800 Weak transcription Fetal Heart heart
33 chr6:27429600-27439800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr6:27429600-27440000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr6:27429600-27440000 Weak transcription Placenta Amnion Placenta Amnion
36 chr6:27429800-27433800 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr6:27429800-27434200 Weak transcription Adipose Nuclei Adipose
38 chr6:27429800-27434400 Weak transcription Stomach Smooth Muscle stomach
39 chr6:27429800-27434600 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr6:27429800-27435400 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr6:27429800-27436200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr6:27429800-27439000 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr6:27429800-27439800 Weak transcription Colonic Mucosa Colon
44 chr6:27430000-27433800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr6:27430000-27434400 Weak transcription NH-A brain
46 chr6:27430000-27436200 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr6:27430000-27438400 Weak transcription HepG2 liver
48 chr6:27430000-27438800 Weak transcription Brain Angular Gyrus brain
49 chr6:27430400-27436200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr6:27430600-27435000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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