The 2.0 version of rSNPBase

Variant report

Variant rs10084883
Chromosome Location chr4:88379543-88379544
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:88344400-88398600 Weak transcription Gastric stomach
2 chr4:88345200-88400000 Weak transcription Rectal Smooth Muscle rectum
3 chr4:88345200-88416400 Weak transcription Colonic Mucosa Colon
4 chr4:88346200-88382600 Weak transcription NHLF lung
5 chr4:88346600-88410400 Weak transcription Esophagus oesophagus
6 chr4:88349400-88381800 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr4:88350600-88380600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr4:88351400-88382400 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr4:88351600-88414600 Weak transcription Psoas Muscle Psoas
10 chr4:88352600-88387200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr4:88354800-88381600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr4:88356600-88382000 Weak transcription Brain Germinal Matrix brain
13 chr4:88357600-88380000 Weak transcription Brain Angular Gyrus brain
14 chr4:88357800-88381600 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr4:88359800-88382200 Weak transcription Fetal Brain Female brain
16 chr4:88360400-88381800 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr4:88361200-88383000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr4:88363400-88380600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr4:88364800-88382800 Weak transcription HMEC breast
20 chr4:88365000-88380800 Weak transcription H9 Cell Line embryonic stem cell
21 chr4:88365000-88403400 Weak transcription Right Ventricle heart
22 chr4:88365200-88381800 Weak transcription HUVEC blood vessel
23 chr4:88366000-88381400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr4:88366600-88382400 Weak transcription Fetal Heart heart
25 chr4:88367400-88380800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr4:88367400-88381600 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr4:88370200-88380200 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr4:88371800-88381800 Weak transcription Thymus Thymus
29 chr4:88372600-88381000 Weak transcription NHDF-Ad bronchial
30 chr4:88372600-88382600 Weak transcription NHEK skin
31 chr4:88372600-88398800 Weak transcription Lung lung
32 chr4:88372800-88386400 Weak transcription HSMM muscle
33 chr4:88372800-88398800 Weak transcription Brain Anterior Caudate brain
34 chr4:88373000-88382000 Weak transcription Hela-S3 cervix
35 chr4:88373800-88380600 Weak transcription Placenta Amnion Placenta Amnion
36 chr4:88373800-88386200 Weak transcription HSMMtube muscle
37 chr4:88373800-88397000 Weak transcription Aorta Aorta
38 chr4:88373800-88397200 Weak transcription Brain Cingulate Gyrus brain
39 chr4:88373800-88397600 Weak transcription Brain Hippocampus Middle brain
40 chr4:88373800-88409800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr4:88374000-88382400 Weak transcription Osteobl bone
42 chr4:88374000-88441000 Weak transcription Spleen Spleen
43 chr4:88374400-88382000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr4:88375400-88380600 Strong transcription Primary B cells from peripheral blood blood
45 chr4:88375600-88381000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr4:88375800-88382000 Weak transcription Muscle Satellite Cultured Cells --
47 chr4:88375800-88409400 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr4:88376000-88380000 Weak transcription Stomach Smooth Muscle stomach
49 chr4:88376200-88398200 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr4:88376600-88381800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015