Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10087739	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10089897	1.00[ASN][1000 genomes]
rs10090892	1.00[ASN][1000 genomes]
rs10096087	1.00[ASN][1000 genomes]
rs10097876	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10101263	1.00[ASN][1000 genomes]
rs1317211	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17613697	1.00[ASN][1000 genomes]
rs1863590	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28488124	1.00[ASN][1000 genomes]
rs28631008	1.00[ASN][1000 genomes]
rs28700205	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28760971	1.00[ASN][1000 genomes]
rs28798408	1.00[ASN][1000 genomes]
rs28893292	1.00[ASN][1000 genomes]
rs41466649	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4265200	1.00[ASN][1000 genomes]
rs60318345	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6472428	1.00[ASN][1000 genomes]
rs6981271	1.00[ASN][1000 genomes]
rs7014621	1.00[ASN][1000 genomes]
rs73282699	1.00[ASN][1000 genomes]
rs7459898	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7460339	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7821207	1.00[ASN][1000 genomes]
rs7821581	1.00[ASN][1000 genomes]
rs7838741	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031633	chr8:69766575-70322790	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv33049	chr8:69836813-69943360	Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv982081	chr8:69929430-69943096	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv3333442	chr8:69932398-69934696	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69930200-69940800	Weak transcription	HSMM	muscle
2	chr8:69930600-69938000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr8:69930800-69942800	Weak transcription	Osteobl	bone

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