Variant report

Variant	rs10119264
Chromosome Location	chr9:100047813-100047814
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10124635	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12335678	0.84[ASW][hapmap];0.96[LWK][hapmap];0.94[MKK][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12352173	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16920253	1.00[AMR][1000 genomes]
rs2219663	1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28441587	1.00[AMR][1000 genomes]
rs28508080	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28670234	1.00[AMR][1000 genomes]
rs57850084	1.00[AMR][1000 genomes]
rs57878624	1.00[AMR][1000 genomes]
rs58056009	1.00[AMR][1000 genomes]
rs6477964	1.00[AMR][1000 genomes]
rs6477965	1.00[AMR][1000 genomes]
rs6478007	1.00[AMR][1000 genomes]
rs7044096	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73654663	1.00[AMR][1000 genomes]
rs73654665	1.00[AMR][1000 genomes]
rs73654684	1.00[AMR][1000 genomes]
rs73654702	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73656821	1.00[AMR][1000 genomes]
rs7850714	1.00[AMR][1000 genomes]
rs7864805	1.00[ASW][hapmap];1.00[LWK][hapmap];0.91[MKK][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs970857	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:108 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100025800-100050200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr9:100035000-100059600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr9:100036800-100052200	Weak transcription	Stomach Mucosa	stomach
4	chr9:100037200-100050200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr9:100038200-100050600	Weak transcription	Esophagus	oesophagus
6	chr9:100038800-100050400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr9:100039000-100050600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr9:100039000-100052800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr9:100039000-100053000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr9:100039000-100054200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr9:100039200-100052800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr9:100039200-100056400	Weak transcription	Small Intestine	intestine
13	chr9:100039600-100055000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr9:100039600-100055600	Weak transcription	NH-A	brain
15	chr9:100039800-100048000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr9:100039800-100050400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr9:100039800-100051800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr9:100039800-100055600	Weak transcription	NHLF	lung
19	chr9:100040800-100055600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr9:100041000-100050400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr9:100041200-100050600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr9:100041400-100059600	Weak transcription	Fetal Brain Male	brain
23	chr9:100041600-100050000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
24	chr9:100041600-100052800	Weak transcription	Placenta Amnion	Placenta Amnion
25	chr9:100041800-100049200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr9:100042200-100048200	Strong transcription	Primary T helper cells PMA-I stimulated	--
27	chr9:100042600-100049000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
28	chr9:100043200-100050200	Weak transcription	Right Ventricle	heart
29	chr9:100043400-100050600	Weak transcription	Thymus	Thymus
30	chr9:100043600-100050000	Weak transcription	Cortex derived primary cultured neurospheres	brain
31	chr9:100043800-100049600	Weak transcription	Fetal Brain Female	brain
32	chr9:100043800-100050000	Weak transcription	Duodenum Mucosa	Duodenum
33	chr9:100043800-100052800	Weak transcription	Hela-S3	cervix
34	chr9:100044000-100049800	Weak transcription	Osteobl	bone
35	chr9:100044000-100050000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr9:100044000-100050200	Weak transcription	Brain Germinal Matrix	brain
37	chr9:100044000-100050400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr9:100044000-100050600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
39	chr9:100044000-100050600	Weak transcription	Colonic Mucosa	Colon
40	chr9:100044000-100052800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr9:100044200-100050000	Weak transcription	Brain Angular Gyrus	brain
42	chr9:100044200-100050200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
43	chr9:100044200-100050400	Weak transcription	Colon Smooth Muscle	Colon
44	chr9:100044200-100050400	Weak transcription	Gastric	stomach
45	chr9:100044200-100050400	Weak transcription	Lung	lung
46	chr9:100044200-100050400	Weak transcription	Rectal Smooth Muscle	rectum
47	chr9:100044200-100050800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
48	chr9:100044200-100052400	Weak transcription	Primary monocytes fromperipheralblood	blood
49	chr9:100044200-100055000	Weak transcription	Psoas Muscle	Psoas
50	chr9:100045800-100049000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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