The 2.0 version of rSNPBase

Variant report

Variant rs58056009
Chromosome Location chr9:100121379-100121380
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100070000-100131400 Weak transcription Fetal Kidney kidney
2 chr9:100077000-100140800 Weak transcription Fetal Brain Male brain
3 chr9:100080400-100126400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr9:100083800-100124000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr9:100086600-100121600 Weak transcription Right Ventricle heart
6 chr9:100086600-100132000 Weak transcription Thymus Thymus
7 chr9:100088000-100126200 Weak transcription Primary B cells from peripheral blood blood
8 chr9:100088200-100127000 Weak transcription Duodenum Mucosa Duodenum
9 chr9:100088600-100128600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr9:100088600-100132800 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr9:100088800-100121400 Weak transcription Gastric stomach
12 chr9:100089200-100128200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr9:100090600-100133800 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr9:100091600-100149200 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr9:100093600-100122400 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr9:100099000-100132200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr9:100104400-100142000 Weak transcription Rectal Smooth Muscle rectum
18 chr9:100104600-100128200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr9:100105400-100127600 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr9:100105800-100128000 Weak transcription Brain Substantia Nigra brain
21 chr9:100106800-100128000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr9:100106800-100143200 Weak transcription Liver Liver
23 chr9:100107000-100131400 Weak transcription Primary hematopoietic stem cells blood
24 chr9:100107200-100130200 Weak transcription Fetal Lung lung
25 chr9:100107200-100138400 Weak transcription Placenta Amnion Placenta Amnion
26 chr9:100108000-100148200 Weak transcription Esophagus oesophagus
27 chr9:100110200-100132200 Weak transcription Primary T cells fromperipheralblood blood
28 chr9:100110800-100121600 Weak transcription Brain Germinal Matrix brain
29 chr9:100112200-100124600 Weak transcription Lung lung
30 chr9:100113000-100123600 Weak transcription Fetal Brain Female brain
31 chr9:100114600-100124200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr9:100114800-100122200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr9:100115400-100144600 Weak transcription Hela-S3 cervix
34 chr9:100115600-100139200 Weak transcription H9 Cell Line embryonic stem cell
35 chr9:100115800-100125400 Weak transcription Dnd41 blood
36 chr9:100116000-100127600 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr9:100116200-100130800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr9:100116400-100130800 Strong transcription Fetal Stomach stomach
39 chr9:100116600-100129200 Strong transcription Stomach Smooth Muscle stomach
40 chr9:100116800-100123000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr9:100116800-100126000 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr9:100117000-100122800 Strong transcription Adipose Nuclei Adipose
43 chr9:100117000-100123200 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr9:100117000-100125600 Strong transcription Ovary ovary
45 chr9:100117400-100124000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr9:100117400-100132400 Weak transcription Fetal Intestine Large intestine
47 chr9:100117400-100145000 Weak transcription Colon Smooth Muscle Colon
48 chr9:100117600-100130000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr9:100117600-100146400 Weak transcription Small Intestine intestine
50 chr9:100118200-100132400 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015