Variant report

Variant	rs10125698
Chromosome Location	chr9:73695209-73695210
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10113933	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10114619	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10120519	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10121545	0.86[EUR][1000 genomes]
rs10122126	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10123815	0.96[EUR][1000 genomes]
rs12341381	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12341540	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12341827	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12352390	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs28640110	1.00[EUR][1000 genomes]
rs28647584	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3010429	1.00[AMR][1000 genomes]
rs57681686	1.00[EUR][1000 genomes]
rs60191817	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7036586	1.00[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73691400-73716200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr9:73693800-73695600	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr9:73693800-73695600	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr9:73694400-73696000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr9:73694600-73695400	Enhancers	H9 Cell Line	embryonic stem cell
6	chr9:73694600-73695600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr9:73694800-73718800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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