Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10129764	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10129815	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10133011	0.83[ASN][1000 genomes]
rs10138530	0.88[ASN][1000 genomes]
rs10142772	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10146471	0.88[ASN][1000 genomes]
rs10147036	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11848791	0.85[ASN][1000 genomes]
rs17107991	0.85[ASN][1000 genomes]
rs1892284	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1953801	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28567569	0.83[ASN][1000 genomes]
rs28656212	0.81[ASN][1000 genomes]
rs28781332	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28781359	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28831768	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55736348	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs57026128	0.88[EUR][1000 genomes]
rs58161097	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs59911766	0.88[ASN][1000 genomes]
rs60005479	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7149583	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7160839	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8013640	0.88[ASN][1000 genomes]
rs8018933	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9323539	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv565042	chr14:70951234-71011734	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1050615	chr14:70954149-71013235	Weak transcription ZNF genes & repeats Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv2763072	chr14:70954149-71013247	Strong transcription ZNF genes & repeats Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70958600-70989000	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr14:70958800-70993800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr14:70965200-70982000	Weak transcription	Stomach Smooth Muscle	stomach
4	chr14:70968600-70989400	Weak transcription	Pancreas	Pancrea
5	chr14:70973400-70985200	Weak transcription	Left Ventricle	heart
6	chr14:70975800-70990000	Weak transcription	Rectal Smooth Muscle	rectum

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