Variant report

Variant	rs7160839
Chromosome Location	chr14:70940766-70940767
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EP300	chr14:70940633-70940833	GM12878	blood:	n/a	n/a
2	EP300	chr14:70940626-70941038	GM12878	blood:	n/a	n/a
3	JUND	chr14:70940438-70941265	GM12878	blood:	n/a	n/a
4	BCL3	chr14:70940595-70940878	GM12878	blood:	n/a	n/a
5	BATF	chr14:70940610-70940834	GM12878	blood:	n/a	n/a
6	SIN3A	chr14:70940712-70940830	GM12878	blood:	n/a	n/a
7	BHLHE40	chr14:70940745-70940773	GM12878	blood:	n/a	n/a
8	FOXM1	chr14:70940544-70940922	GM12878	blood:	n/a	n/a
9	RUNX3	chr14:70940490-70940940	GM12878	blood:	n/a	n/a
10	ATF2	chr14:70940635-70940949	GM12878	blood:	n/a	n/a
11	TBL1XR1	chr14:70940683-70940834	GM12878	blood:	n/a	n/a
12	EP300	chr14:70940588-70940897	GM12878	blood:	n/a	n/a
13	CREB1	chr14:70940474-70940860	GM12878	blood:	n/a	n/a
14	IRF4	chr14:70940550-70940825	GM12878	blood:	n/a	n/a
15	BATF	chr14:70940630-70940909	GM12878	blood:	n/a	n/a
16	NFIC	chr14:70940451-70940932	GM12878	blood:	n/a	n/a

Variant related genes	Relation type
ENSG00000176082	TF binding region

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10129764	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10129815	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10133011	0.98[ASN][1000 genomes]
rs10135431	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10138530	0.93[ASN][1000 genomes]
rs10139100	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10139883	0.84[EUR][1000 genomes]
rs10139978	0.94[GIH][hapmap];0.85[MEX][hapmap]
rs10142772	0.94[AMR][1000 genomes]
rs10143078	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs10143578	1.00[CEU][hapmap]
rs10146471	0.93[ASN][1000 genomes]
rs10146632	1.00[CEU][hapmap]
rs10147036	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10148733	0.84[EUR][1000 genomes]
rs11848791	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12100666	0.88[EUR][1000 genomes]
rs17107991	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1892284	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1953801	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28567569	0.82[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs28656212	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28781332	0.95[ASN][1000 genomes]
rs28781359	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28831768	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs28866786	0.84[EUR][1000 genomes]
rs3764181	0.84[EUR][1000 genomes]
rs55736348	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57026128	0.83[ASN][1000 genomes]
rs58161097	0.95[ASN][1000 genomes]
rs58601276	0.84[EUR][1000 genomes]
rs59911766	0.93[ASN][1000 genomes]
rs60005479	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60455014	0.84[EUR][1000 genomes]
rs7141619	1.00[CEU][hapmap]
rs7147252	1.00[CEU][hapmap]
rs7149583	0.85[ASN][1000 genomes]
rs73291950	0.84[EUR][1000 genomes]
rs8013640	0.93[ASN][1000 genomes]
rs8018933	0.95[ASN][1000 genomes]
rs9323539	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70910600-70955600	Weak transcription	Left Ventricle	heart
2	chr14:70933400-70941200	Weak transcription	Brain Hippocampus Middle	brain
3	chr14:70934200-70943800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr14:70936000-70943800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr14:70937800-70944200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr14:70938600-70943600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr14:70938800-70941800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr14:70939200-70943600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr14:70939200-70943600	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr14:70940000-70941800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr14:70940200-70943600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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