Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:112904098..112905667-chr10:112909742..112912400,2	K562	blood:
2	chr10:112903232..112905667-chr10:112909742..112912400,3	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10159575	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10160191	0.97[ASN][1000 genomes]
rs10466194	0.97[ASN][1000 genomes]
rs10885092	0.93[ASN][1000 genomes]
rs10885093	0.82[ASN][1000 genomes]
rs10885095	0.97[ASN][1000 genomes]
rs10885096	0.97[ASN][1000 genomes]
rs10885107	0.83[EUR][1000 genomes]
rs11195434	0.93[ASN][1000 genomes]
rs11195441	0.95[ASN][1000 genomes]
rs12248211	0.96[ASN][1000 genomes]
rs12262597	0.93[ASN][1000 genomes]
rs12263061	0.96[ASN][1000 genomes]
rs12267010	0.96[ASN][1000 genomes]
rs12571958	0.97[ASN][1000 genomes]
rs12573370	0.93[ASN][1000 genomes]
rs1335707	0.98[ASN][1000 genomes]
rs56321879	0.97[ASN][1000 genomes]
rs68077731	0.85[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs68106015	0.87[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs72641329	0.97[ASN][1000 genomes]
rs72641330	0.96[ASN][1000 genomes]
rs72641331	0.95[ASN][1000 genomes]
rs73349707	0.80[AFR][1000 genomes]
rs945336	0.97[ASN][1000 genomes]
rs954385	0.85[AFR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498045	chr10:112794518-113353550	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv467456	chr10:112909105-112941780	Weak transcription Enhancers Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv552173	chr10:112909105-112941780	Weak transcription Bivalent Enhancer Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:112911400-112912600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr10:112911600-112912000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:112911600-112912000	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr10:112911600-112912200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr10:112911600-112912400	Enhancers	H1 Cell Line	embryonic stem cell
6	chr10:112911800-112912000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr10:112911800-112912200	Active TSS	Pancreatic Islets	Pancreatic Islet

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