The 2.0 version of rSNPBase

Variant report

Variant rs10174894
Chromosome Location chr2:47140152-47140153
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:47119600-47140800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:47129400-47140200 Strong transcription Placenta Placenta
3 chr2:47130600-47140800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:47131000-47140200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr2:47131000-47140400 Strong transcription Fetal Stomach stomach
6 chr2:47131000-47140600 Strong transcription Fetal Intestine Small intestine
7 chr2:47131000-47140600 Strong transcription Fetal Muscle Leg muscle
8 chr2:47131200-47140400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr2:47131200-47141800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr2:47131400-47140200 Strong transcription Primary hematopoietic stem cells short term culture blood
11 chr2:47131400-47142000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr2:47133600-47141000 Weak transcription Fetal Heart heart
13 chr2:47134800-47141000 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr2:47135000-47141200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr2:47135200-47140600 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr2:47135200-47140800 Weak transcription Small Intestine intestine
17 chr2:47136000-47140800 Weak transcription Fetal Brain Male brain
18 chr2:47136400-47140600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr2:47136400-47140800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr2:47136600-47140400 Genic enhancers HepG2 liver
21 chr2:47136800-47141000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr2:47136800-47141800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr2:47137200-47140600 Weak transcription Aorta Aorta
24 chr2:47137200-47141000 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr2:47137200-47141200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr2:47137200-47142000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr2:47137400-47140600 Weak transcription Right Atrium heart
28 chr2:47137400-47140600 Weak transcription HSMMtube muscle
29 chr2:47137600-47140400 Weak transcription Placenta Amnion Placenta Amnion
30 chr2:47137600-47140400 Weak transcription GM12878-XiMat blood
31 chr2:47137600-47140600 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr2:47137600-47140800 Weak transcription Brain Cingulate Gyrus brain
33 chr2:47137600-47141000 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr2:47137600-47141000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr2:47137600-47141200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr2:47137800-47140400 Weak transcription Duodenum Mucosa Duodenum
37 chr2:47137800-47140600 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr2:47137800-47140600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr2:47137800-47140600 Weak transcription Left Ventricle heart
40 chr2:47137800-47140800 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr2:47137800-47140800 Weak transcription Esophagus oesophagus
42 chr2:47137800-47140800 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr2:47137800-47141000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr2:47137800-47141000 Weak transcription Primary hematopoietic stem cells blood
45 chr2:47137800-47141200 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr2:47137800-47141400 Weak transcription Primary B cells from cord blood blood
47 chr2:47138000-47140200 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr2:47138000-47140400 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr2:47138000-47140600 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr2:47138000-47140600 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015