The 2.0 version of rSNPBase

Variant report

Variant rs62136822
Chromosome Location chr6:144106038-144106039
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:144067800-144122000 Weak transcription Colonic Mucosa Colon
2 chr6:144070200-144122000 Weak transcription Small Intestine intestine
3 chr6:144070800-144106200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:144072600-144106400 Weak transcription HMEC breast
5 chr6:144074200-144113200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr6:144077800-144122000 Weak transcription Fetal Brain Male brain
7 chr6:144080600-144122000 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr6:144083600-144128600 Weak transcription Hela-S3 cervix
9 chr6:144085000-144113800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr6:144085200-144113800 Weak transcription Brain Hippocampus Middle brain
11 chr6:144086600-144106400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr6:144087000-144106600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr6:144087000-144122000 Weak transcription Pancreas Pancrea
14 chr6:144088000-144106400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr6:144088800-144113600 Weak transcription A549 lung
16 chr6:144090000-144106400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr6:144092800-144106200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr6:144092800-144110400 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr6:144093200-144112600 Weak transcription Fetal Kidney kidney
20 chr6:144093600-144108200 Weak transcription Brain Substantia Nigra brain
21 chr6:144095600-144107600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr6:144096400-144106400 Weak transcription Aorta Aorta
23 chr6:144096400-144109800 Weak transcription NHLF lung
24 chr6:144096400-144122000 Weak transcription Stomach Mucosa stomach
25 chr6:144096600-144106200 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr6:144096600-144106800 Weak transcription Lung lung
27 chr6:144096600-144109200 Weak transcription Ovary ovary
28 chr6:144096600-144110000 Weak transcription Right Ventricle heart
29 chr6:144096600-144111000 Weak transcription NHEK skin
30 chr6:144096600-144113600 Strong transcription Placenta Placenta
31 chr6:144096600-144113800 Weak transcription Colon Smooth Muscle Colon
32 chr6:144096600-144122000 Weak transcription Psoas Muscle Psoas
33 chr6:144098200-144106200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr6:144098200-144106400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr6:144098200-144109800 Weak transcription Esophagus oesophagus
36 chr6:144098200-144111400 Weak transcription HSMMtube muscle
37 chr6:144098400-144106400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr6:144098400-144106400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr6:144098400-144113800 Weak transcription Gastric stomach
40 chr6:144098600-144108200 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr6:144098600-144109600 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr6:144100400-144106400 Weak transcription Primary hematopoietic stem cells blood
43 chr6:144100400-144109400 Weak transcription Primary T cells from cord blood blood
44 chr6:144100400-144111000 Weak transcription Rectal Smooth Muscle rectum
45 chr6:144101200-144107000 Strong transcription Fetal Lung lung
46 chr6:144102000-144122000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr6:144102200-144109800 Weak transcription Liver Liver
48 chr6:144102400-144106200 Weak transcription Left Ventricle heart
49 chr6:144102400-144109200 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr6:144102400-144109800 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015