The 2.0 version of rSNPBase

Variant report

Variant rs34581142
Chromosome Location chr2:47140612-47140613
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:47119600-47140800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:47130600-47140800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:47131200-47141800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr2:47131400-47142000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr2:47133600-47141000 Weak transcription Fetal Heart heart
6 chr2:47134800-47141000 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr2:47135000-47141200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr2:47135200-47140800 Weak transcription Small Intestine intestine
9 chr2:47136000-47140800 Weak transcription Fetal Brain Male brain
10 chr2:47136400-47140800 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr2:47136800-47141000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr2:47136800-47141800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr2:47137200-47141000 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr2:47137200-47141200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr2:47137200-47142000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:47137600-47140800 Weak transcription Brain Cingulate Gyrus brain
17 chr2:47137600-47141000 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr2:47137600-47141000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr2:47137600-47141200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr2:47137800-47140800 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr2:47137800-47140800 Weak transcription Esophagus oesophagus
22 chr2:47137800-47140800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr2:47137800-47141000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr2:47137800-47141000 Weak transcription Primary hematopoietic stem cells blood
25 chr2:47137800-47141200 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr2:47137800-47141400 Weak transcription Primary B cells from cord blood blood
27 chr2:47138000-47140800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr2:47138000-47140800 Weak transcription Primary monocytes fromperipheralblood blood
29 chr2:47138000-47140800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr2:47138000-47140800 Weak transcription Colonic Mucosa Colon
31 chr2:47138000-47141000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:47138000-47141000 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr2:47138200-47140800 Weak transcription H1 Cell Line embryonic stem cell
34 chr2:47138200-47140800 Weak transcription Brain Inferior Temporal Lobe brain
35 chr2:47138200-47140800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr2:47138200-47141000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr2:47138200-47141200 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr2:47138200-47141600 Weak transcription Fetal Kidney kidney
39 chr2:47138400-47140800 Weak transcription Primary T cells from cord blood blood
40 chr2:47138400-47140800 Weak transcription Adipose Nuclei Adipose
41 chr2:47138400-47141800 Weak transcription H9 Cell Line embryonic stem cell
42 chr2:47139200-47140800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr2:47139400-47140800 Enhancers Skeletal Muscle Male skeletal muscle
44 chr2:47139600-47140800 Enhancers Muscle Satellite Cultured Cells --
45 chr2:47139600-47141400 Enhancers Colon Smooth Muscle Colon
46 chr2:47139800-47140800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr2:47139800-47140800 Enhancers Psoas Muscle Psoas
48 chr2:47139800-47140800 Genic enhancers Dnd41 blood
49 chr2:47139800-47141000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr2:47139800-47141000 Enhancers Brain Hippocampus Middle brain

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Last update: Aug 31, 2015