The 2.0 version of rSNPBase

Variant report

Variant rs13392448
Chromosome Location chr2:47166410-47166411
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:47144200-47166600 Weak transcription Pancreas Pancrea
2 chr2:47144800-47167000 Weak transcription Fetal Lung lung
3 chr2:47146000-47167400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr2:47150600-47166600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr2:47150600-47167000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr2:47151000-47166800 Weak transcription Small Intestine intestine
7 chr2:47153800-47166600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr2:47154400-47166800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:47155800-47166600 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr2:47157200-47166600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:47157400-47166600 Weak transcription Primary hematopoietic stem cells blood
12 chr2:47160000-47167200 Weak transcription Fetal Stomach stomach
13 chr2:47160600-47166800 Weak transcription GM12878-XiMat blood
14 chr2:47161600-47166600 Weak transcription Primary B cells from cord blood blood
15 chr2:47161600-47166600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr2:47161600-47166600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr2:47161600-47166800 Weak transcription Primary T cells from cord blood blood
18 chr2:47162400-47166800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr2:47164000-47166600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr2:47164400-47166800 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr2:47165000-47166600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr2:47165000-47166600 Weak transcription Brain Hippocampus Middle brain
23 chr2:47165000-47166600 Weak transcription Spleen Spleen
24 chr2:47165400-47167000 Weak transcription Right Atrium heart
25 chr2:47166200-47167200 Enhancers Primary T helper cells PMA-I stimulated --
26 chr2:47166200-47167400 Enhancers Placenta Placenta
27 chr2:47166400-47166800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr2:47166400-47166800 Enhancers Fetal Thymus thymus
29 chr2:47166400-47166800 Enhancers Thymus Thymus
30 chr2:47166400-47166800 Enhancers A549 lung
31 chr2:47166400-47166800 Enhancers HepG2 liver
32 chr2:47166400-47167000 Enhancers Duodenum Mucosa Duodenum
33 chr2:47166400-47167000 Enhancers Monocytes-CD14+_RO01746 blood
34 chr2:47166400-47167000 Enhancers Osteobl bone
35 chr2:47166400-47167200 Enhancers Stomach Smooth Muscle stomach
36 chr2:47166400-47167400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:47166400-47167400 Enhancers Primary monocytes fromperipheralblood blood
38 chr2:47166400-47167400 Enhancers Primary B cells from peripheral blood blood
39 chr2:47166400-47167600 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr2:47166400-47167600 Enhancers Dnd41 blood
41 chr2:47166400-47167800 Flanking Active TSS Hela-S3 cervix

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015