The 2.0 version of rSNPBase

Variant report

Variant rs6706031
Chromosome Location chr2:47140978-47140979
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:47131200-47141800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr2:47131400-47142000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr2:47133600-47141000 Weak transcription Fetal Heart heart
4 chr2:47134800-47141000 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr2:47135000-47141200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr2:47136800-47141000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr2:47136800-47141800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr2:47137200-47141000 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr2:47137200-47141200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr2:47137200-47142000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr2:47137600-47141000 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr2:47137600-47141000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr2:47137600-47141200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr2:47137800-47141000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr2:47137800-47141000 Weak transcription Primary hematopoietic stem cells blood
16 chr2:47137800-47141200 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr2:47137800-47141400 Weak transcription Primary B cells from cord blood blood
18 chr2:47138000-47141000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:47138000-47141000 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr2:47138200-47141000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr2:47138200-47141200 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr2:47138200-47141600 Weak transcription Fetal Kidney kidney
23 chr2:47138400-47141800 Weak transcription H9 Cell Line embryonic stem cell
24 chr2:47139600-47141400 Enhancers Colon Smooth Muscle Colon
25 chr2:47139800-47141000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:47139800-47141000 Enhancers Brain Hippocampus Middle brain
27 chr2:47139800-47141000 Enhancers Ovary ovary
28 chr2:47139800-47141000 Enhancers Skeletal Muscle Female skeletal muscle
29 chr2:47139800-47141800 Enhancers Brain Substantia Nigra brain
30 chr2:47139800-47142200 Enhancers Sigmoid Colon Sigmoid Colon
31 chr2:47140000-47141000 Weak transcription Brain Angular Gyrus brain
32 chr2:47140000-47141000 Transcr. at gene 5' and 3' Osteobl bone
33 chr2:47140000-47141200 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
34 chr2:47140000-47141800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr2:47140200-47141000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:47140200-47141000 Weak transcription Primary B cells from peripheral blood blood
37 chr2:47140200-47141000 Enhancers Duodenum Smooth Muscle Duodenum
38 chr2:47140200-47141400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
39 chr2:47140200-47141400 Enhancers Fetal Intestine Large intestine
40 chr2:47140200-47141400 Transcr. at gene 5' and 3' K562 blood
41 chr2:47140400-47141000 Enhancers Duodenum Mucosa Duodenum
42 chr2:47140400-47141000 Enhancers Stomach Mucosa stomach
43 chr2:47140400-47141000 Enhancers GM12878-XiMat blood
44 chr2:47140400-47141200 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
45 chr2:47140400-47141400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr2:47140400-47141400 Transcr. at gene 5' and 3' A549 lung
47 chr2:47140400-47141400 Flanking Active TSS HepG2 liver
48 chr2:47140400-47141400 Transcr. at gene 5' and 3' NHLF lung
49 chr2:47140400-47141600 Enhancers Fetal Lung lung
50 chr2:47140400-47142000 Enhancers Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015