Variant report

Variant	rs10218724
Chromosome Location	chr1:209214739-209214740
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10863749	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12037144	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12037818	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17013951	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17013955	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2093788	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2104309	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6540499	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6666007	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6677861	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6685963	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6689506	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6689873	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:209209600-209218800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr1:209210800-209214800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:209212000-209219200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:209213000-209215400	Weak transcription	Pancreas	Pancrea
5	chr1:209213200-209214800	Enhancers	NHDF-Ad	bronchial
6	chr1:209213200-209221800	Weak transcription	Osteobl	bone
7	chr1:209213200-209224400	Weak transcription	Esophagus	oesophagus
8	chr1:209213400-209214800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr1:209213400-209215000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr1:209214000-209218400	Weak transcription	HSMM	muscle
11	chr1:209214000-209219000	Weak transcription	NH-A	brain
12	chr1:209214400-209222000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr1:209214600-209214800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr1:209214600-209217200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr1:209214600-209217200	Weak transcription	NHEK	skin
16	chr1:209214600-209218000	Weak transcription	HMEC	breast
17	chr1:209214600-209218400	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr1:209214600-209222000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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