Variant report

Variant	rs1022184
Chromosome Location	chr3:68579433-68579434
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs13434171	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1397249	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1397250	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2202978	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2665529	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2665534	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2665544	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4488833	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6764527	0.93[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6765886	0.83[AMR][1000 genomes]
rs6790906	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1832396	chr3:68478762-68641509	Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68579400-68579800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
2	chr3:68579400-68580600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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