Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1015265	0.81[ASN][1000 genomes]
rs10231814	0.94[ASN][1000 genomes]
rs10233212	0.93[ASN][1000 genomes]
rs10240622	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10242812	1.00[ASN][1000 genomes]
rs10499580	1.00[ASN][1000 genomes]
rs12673949	0.81[ASN][1000 genomes]
rs1404282	0.81[ASN][1000 genomes]
rs1524529	0.81[ASN][1000 genomes]
rs1608663	0.81[ASN][1000 genomes]
rs17136532	1.00[ASN][1000 genomes]
rs17155388	1.00[ASN][1000 genomes]
rs1980330	0.81[ASN][1000 genomes]
rs2041715	0.81[ASN][1000 genomes]
rs2391440	0.81[ASN][1000 genomes]
rs2391444	0.81[ASN][1000 genomes]
rs6462033	0.81[ASN][1000 genomes]
rs6952874	1.00[ASN][1000 genomes]
rs6980308	1.00[ASN][1000 genomes]
rs7786973	0.81[ASN][1000 genomes]
rs9639559	0.81[ASN][1000 genomes]
rs974883	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830930	chr7:27395838-27587355	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27539400-27558000	Weak transcription	Fetal Stomach	stomach
2	chr7:27541000-27548800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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