Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1022731	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12215252	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs1338907	0.82[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1342640	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1418433	0.86[ASN][1000 genomes]
rs1832897	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2145826	0.82[ASN][1000 genomes]
rs227831	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs227837	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs227838	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs227841	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs227843	0.96[ASN][1000 genomes]
rs227847	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs227848	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs227850	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs227851	0.95[ASN][1000 genomes]
rs227854	0.81[ASN][1000 genomes]
rs227855	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs6458412	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6933373	0.81[ASN][1000 genomes]
rs911524	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs9367207	0.95[EUR][1000 genomes]
rs9381350	0.96[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9463011	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817071	chr6:44670110-44698829	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44667200-44691000	Weak transcription	Right Atrium	heart
2	chr6:44679400-44681200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr6:44679400-44683600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:44679600-44681600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr6:44679600-44682400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr6:44679800-44681200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr6:44679800-44682200	Enhancers	Fetal Muscle Leg	muscle
8	chr6:44680000-44680200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr6:44680000-44680400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
10	chr6:44680000-44681200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr6:44680000-44681400	Enhancers	HSMMtube	muscle

Quick Search: