The 2.0 version of rSNPBase

Variant report

Variant rs10258552
Chromosome Location chr7:99257419-99257420
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:99228400-99258000 Weak transcription Colon Smooth Muscle Colon
2 chr7:99228400-99258800 Weak transcription Ovary ovary
3 chr7:99229200-99267400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr7:99229200-99275000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr7:99229400-99257800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr7:99229800-99257600 Weak transcription Pancreas Pancrea
7 chr7:99229800-99260200 Weak transcription Left Ventricle heart
8 chr7:99229800-99272600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr7:99230400-99257600 Weak transcription Rectal Smooth Muscle rectum
10 chr7:99230400-99272000 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr7:99230800-99258000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr7:99231800-99258000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr7:99231800-99258000 Weak transcription Brain Substantia Nigra brain
14 chr7:99231800-99260200 Weak transcription K562 blood
15 chr7:99231800-99264600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr7:99231800-99268000 Weak transcription Brain Anterior Caudate brain
17 chr7:99231800-99268600 Weak transcription HepG2 liver
18 chr7:99232000-99258600 Weak transcription Primary B cells from cord blood blood
19 chr7:99232000-99275000 Weak transcription A549 lung
20 chr7:99233000-99266000 Weak transcription NHEK skin
21 chr7:99235800-99276400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr7:99236800-99258400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr7:99236800-99260400 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr7:99236800-99263000 Weak transcription Placenta Placenta
25 chr7:99237000-99272200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr7:99237200-99258000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr7:99237200-99258800 Weak transcription Primary B cells from peripheral blood blood
28 chr7:99237200-99264800 Weak transcription Right Ventricle heart
29 chr7:99241000-99268800 Weak transcription Primary T cells fromperipheralblood blood
30 chr7:99241600-99264600 Weak transcription Brain Inferior Temporal Lobe brain
31 chr7:99242200-99258800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr7:99242200-99261400 Weak transcription HSMMtube muscle
33 chr7:99242400-99272400 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr7:99242800-99261000 Weak transcription Aorta Aorta
35 chr7:99242800-99267600 Weak transcription GM12878-XiMat blood
36 chr7:99243000-99278800 Weak transcription Brain Angular Gyrus brain
37 chr7:99243200-99267600 Weak transcription Brain Cingulate Gyrus brain
38 chr7:99243400-99257600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr7:99243600-99276800 Weak transcription Stomach Smooth Muscle stomach
40 chr7:99247800-99266800 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr7:99249600-99257600 Weak transcription Colonic Mucosa Colon
42 chr7:99250400-99258200 Weak transcription Primary T cells from cord blood blood
43 chr7:99250800-99257600 Weak transcription Adipose Nuclei Adipose
44 chr7:99251600-99264000 Weak transcription Psoas Muscle Psoas
45 chr7:99251600-99276400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr7:99253400-99258000 Weak transcription Lung lung
47 chr7:99254400-99275400 Weak transcription Fetal Stomach stomach
48 chr7:99255000-99258000 Weak transcription Small Intestine intestine
49 chr7:99255800-99277000 Weak transcription Fetal Brain Male brain
50 chr7:99256200-99263400 Weak transcription HSMM muscle

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Last update: Aug 31, 2015