The 2.0 version of rSNPBase

Variant report

Variant rs10268253
Chromosome Location chr7:38828468-38828469
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38757200-38835400 Weak transcription Psoas Muscle Psoas
2 chr7:38763400-38828800 Weak transcription HepG2 liver
3 chr7:38780800-38828800 Weak transcription Gastric stomach
4 chr7:38784800-38835000 Weak transcription NHEK skin
5 chr7:38785600-38834600 Weak transcription HMEC breast
6 chr7:38785600-38835000 Weak transcription NH-A brain
7 chr7:38793400-38828600 Weak transcription Small Intestine intestine
8 chr7:38793400-38861200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr7:38793600-38832600 Weak transcription Brain Angular Gyrus brain
10 chr7:38798200-38828800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr7:38800200-38837600 Weak transcription H9 Cell Line embryonic stem cell
12 chr7:38803200-38845400 Weak transcription Colonic Mucosa Colon
13 chr7:38803200-38846000 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr7:38804400-38836200 Weak transcription Fetal Brain Male brain
15 chr7:38806200-38828800 Weak transcription Pancreas Pancrea
16 chr7:38806600-38828800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr7:38806800-38828800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr7:38806800-38828800 Weak transcription Brain Substantia Nigra brain
19 chr7:38806800-38828800 Weak transcription Esophagus oesophagus
20 chr7:38806800-38828800 Weak transcription Thymus Thymus
21 chr7:38806800-38828800 Weak transcription Spleen Spleen
22 chr7:38806800-38832800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr7:38809200-38828600 Weak transcription Brain Anterior Caudate brain
24 chr7:38812600-38831400 Weak transcription A549 lung
25 chr7:38812800-38834800 Weak transcription HSMMtube muscle
26 chr7:38813000-38828800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr7:38813600-38828800 Weak transcription Fetal Muscle Trunk muscle
28 chr7:38813800-38828800 Weak transcription Muscle Satellite Cultured Cells --
29 chr7:38813800-38830600 Weak transcription Rectal Smooth Muscle rectum
30 chr7:38813800-38834200 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr7:38813800-38836400 Weak transcription HUVEC blood vessel
32 chr7:38813800-38839600 Weak transcription Right Ventricle heart
33 chr7:38813800-38857400 Weak transcription HSMM muscle
34 chr7:38814000-38828600 Weak transcription Fetal Muscle Leg muscle
35 chr7:38814800-38828600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr7:38815000-38828600 Weak transcription Ovary ovary
37 chr7:38815000-38829000 Weak transcription K562 blood
38 chr7:38816200-38828800 Weak transcription Fetal Brain Female brain
39 chr7:38816400-38828600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr7:38816400-38828600 Weak transcription Stomach Smooth Muscle stomach
41 chr7:38816600-38828600 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr7:38816600-38828800 Weak transcription Aorta Aorta
43 chr7:38816600-38828800 Weak transcription Fetal Thymus thymus
44 chr7:38816600-38828800 Weak transcription NHLF lung
45 chr7:38818400-38833000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr7:38819400-38828800 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr7:38820000-38836600 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr7:38820600-38828800 Weak transcription Lung lung
49 chr7:38822000-38828800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr7:38822000-38828800 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015