Variant report

Variant	rs10276336
Chromosome Location	chr7:129217283-129217284
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10225103	0.89[ASN][1000 genomes]
rs10227655	0.89[ASN][1000 genomes]
rs10235960	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10271270	0.89[ASN][1000 genomes]
rs10275661	0.89[ASN][1000 genomes]
rs10278897	0.89[ASN][1000 genomes]
rs12669389	0.86[ASN][1000 genomes]
rs2007352	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2402962	0.86[ASN][1000 genomes]
rs36087637	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4469397	0.89[ASN][1000 genomes]
rs73721766	0.89[ASN][1000 genomes]
rs73721770	0.89[ASN][1000 genomes]
rs754386	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7787121	0.89[ASN][1000 genomes]
rs7790595	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831128	chr7:129063040-129240800	Weak transcription Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:129215000-129217600	Weak transcription	Fetal Muscle Leg	muscle
2	chr7:129215000-129217600	Weak transcription	HSMMtube	muscle
3	chr7:129216600-129217600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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