The 2.0 version of rSNPBase

Variant report

Variant rs10280140
Chromosome Location chr7:38935157-38935158
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38879800-38938000 Weak transcription Right Ventricle heart
2 chr7:38886200-38947800 Weak transcription Stomach Smooth Muscle stomach
3 chr7:38889400-38948200 Weak transcription Gastric stomach
4 chr7:38903800-38939600 Weak transcription A549 lung
5 chr7:38903800-38947000 Weak transcription Small Intestine intestine
6 chr7:38905600-38937800 Weak transcription Colonic Mucosa Colon
7 chr7:38906000-38947800 Weak transcription H1 Cell Line embryonic stem cell
8 chr7:38908000-38941000 Weak transcription Colon Smooth Muscle Colon
9 chr7:38908200-38935400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr7:38908200-38935400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr7:38908200-38938600 Weak transcription Rectal Smooth Muscle rectum
12 chr7:38908600-38935200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr7:38908800-38935400 Weak transcription Muscle Satellite Cultured Cells --
14 chr7:38908800-38943000 Weak transcription Esophagus oesophagus
15 chr7:38908800-38947800 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr7:38908800-38948000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr7:38909000-38947800 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr7:38911800-38948200 Weak transcription Aorta Aorta
19 chr7:38916600-38941600 Weak transcription Placenta Amnion Placenta Amnion
20 chr7:38916800-38948200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr7:38918800-38948000 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr7:38919400-38942200 Weak transcription Pancreas Pancrea
23 chr7:38920400-38940800 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr7:38920600-38935400 Weak transcription Brain Hippocampus Middle brain
25 chr7:38920600-38936200 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr7:38920800-38942400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr7:38921000-38938000 Weak transcription Brain Anterior Caudate brain
28 chr7:38921000-38946800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr7:38921200-38935600 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr7:38921800-38947800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr7:38925200-38947800 Weak transcription HUVEC blood vessel
32 chr7:38925800-38935400 Weak transcription Thymus Thymus
33 chr7:38926400-38948000 Weak transcription H9 Cell Line embryonic stem cell
34 chr7:38926600-38941800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr7:38927400-38935600 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr7:38928000-38947400 Weak transcription Brain Cingulate Gyrus brain
37 chr7:38928800-38942200 Weak transcription NHDF-Ad bronchial
38 chr7:38929200-38947800 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr7:38930000-38947600 Weak transcription NHLF lung
40 chr7:38930200-38935200 Weak transcription Fetal Lung lung
41 chr7:38930200-38946800 Weak transcription K562 blood
42 chr7:38930200-38947400 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr7:38930200-38947400 Weak transcription HSMM muscle
44 chr7:38930200-38947600 Weak transcription Fetal Kidney kidney
45 chr7:38930200-38947800 Weak transcription Brain Inferior Temporal Lobe brain
46 chr7:38930400-38935400 Weak transcription Fetal Muscle Trunk muscle
47 chr7:38931000-38945000 Weak transcription Primary B cells from cord blood blood
48 chr7:38931200-38947400 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr7:38931400-38935400 Weak transcription Fetal Brain Female brain
50 chr7:38931800-38936600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015