The 2.0 version of rSNPBase

Variant report

Variant rs73123612
Chromosome Location chr7:38877828-38877829
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38835600-38900800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr7:38858600-38901600 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr7:38858800-38907600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr7:38859000-38895200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr7:38859800-38900800 Weak transcription Primary T cells fromperipheralblood blood
6 chr7:38860600-38900200 Weak transcription Fetal Intestine Large intestine
7 chr7:38863000-38888200 Weak transcription Fetal Intestine Small intestine
8 chr7:38863800-38879600 Weak transcription Fetal Lung lung
9 chr7:38865800-38879600 Weak transcription Right Atrium heart
10 chr7:38866000-38886400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr7:38867400-38905200 Weak transcription Left Ventricle heart
12 chr7:38867600-38879600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr7:38869600-38888400 Weak transcription Primary monocytes fromperipheralblood blood
14 chr7:38870000-38888200 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr7:38870000-38895600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr7:38870200-38895600 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr7:38871000-38884400 Weak transcription Brain Cingulate Gyrus brain
18 chr7:38871400-38880400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr7:38871400-38905800 Weak transcription Aorta Aorta
20 chr7:38871400-38920000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr7:38871600-38878400 Weak transcription Brain Angular Gyrus brain
22 chr7:38871600-38879800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr7:38871600-38906000 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr7:38873000-38907600 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr7:38873200-38884400 Weak transcription Gastric stomach
26 chr7:38873200-38889200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr7:38873200-38919200 Weak transcription Pancreas Pancrea
28 chr7:38874400-38878600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr7:38875800-38897400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr7:38876400-38906200 Weak transcription Duodenum Mucosa Duodenum
31 chr7:38876600-38878400 Weak transcription Fetal Brain Female brain
32 chr7:38876800-38878000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr7:38877000-38895600 Weak transcription Spleen Spleen
34 chr7:38877200-38879600 Weak transcription Primary B cells from cord blood blood
35 chr7:38877200-38888200 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr7:38877200-38900800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr7:38877200-38901200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr7:38877400-38878400 Weak transcription Primary T cells from cord blood blood
39 chr7:38877400-38888400 Weak transcription Primary B cells from peripheral blood blood
40 chr7:38877400-38896200 Weak transcription Primary hematopoietic stem cells blood
41 chr7:38877800-38878000 Enhancers Pancreatic Islets Pancreatic Islet
42 chr7:38877800-38880800 Enhancers Fetal Brain Male brain

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Last update: Aug 31, 2015