The 2.0 version of rSNPBase

Variant report

Variant rs3801114
Chromosome Location chr7:38935799-38935800
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38879800-38938000 Weak transcription Right Ventricle heart
2 chr7:38886200-38947800 Weak transcription Stomach Smooth Muscle stomach
3 chr7:38889400-38948200 Weak transcription Gastric stomach
4 chr7:38903800-38939600 Weak transcription A549 lung
5 chr7:38903800-38947000 Weak transcription Small Intestine intestine
6 chr7:38905600-38937800 Weak transcription Colonic Mucosa Colon
7 chr7:38906000-38947800 Weak transcription H1 Cell Line embryonic stem cell
8 chr7:38908000-38941000 Weak transcription Colon Smooth Muscle Colon
9 chr7:38908200-38938600 Weak transcription Rectal Smooth Muscle rectum
10 chr7:38908800-38943000 Weak transcription Esophagus oesophagus
11 chr7:38908800-38947800 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr7:38908800-38948000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr7:38909000-38947800 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr7:38911800-38948200 Weak transcription Aorta Aorta
15 chr7:38916600-38941600 Weak transcription Placenta Amnion Placenta Amnion
16 chr7:38916800-38948200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr7:38918800-38948000 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr7:38919400-38942200 Weak transcription Pancreas Pancrea
19 chr7:38920400-38940800 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr7:38920600-38936200 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr7:38920800-38942400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr7:38921000-38938000 Weak transcription Brain Anterior Caudate brain
23 chr7:38921000-38946800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr7:38921800-38947800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr7:38925200-38947800 Weak transcription HUVEC blood vessel
26 chr7:38926400-38948000 Weak transcription H9 Cell Line embryonic stem cell
27 chr7:38926600-38941800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr7:38928000-38947400 Weak transcription Brain Cingulate Gyrus brain
29 chr7:38928800-38942200 Weak transcription NHDF-Ad bronchial
30 chr7:38929200-38947800 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr7:38930000-38947600 Weak transcription NHLF lung
32 chr7:38930200-38946800 Weak transcription K562 blood
33 chr7:38930200-38947400 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr7:38930200-38947400 Weak transcription HSMM muscle
35 chr7:38930200-38947600 Weak transcription Fetal Kidney kidney
36 chr7:38930200-38947800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr7:38931000-38945000 Weak transcription Primary B cells from cord blood blood
38 chr7:38931200-38947400 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr7:38931800-38936600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr7:38931800-38936600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr7:38932200-38948000 Weak transcription Psoas Muscle Psoas
42 chr7:38932600-38938000 Strong transcription Fetal Intestine Small intestine
43 chr7:38932600-38938000 Strong transcription Monocytes-CD14+_RO01746 blood
44 chr7:38932800-38948000 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr7:38933000-38941800 Weak transcription Lung lung
46 chr7:38933000-38942200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr7:38933000-38947800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr7:38933000-38948200 Weak transcription Spleen Spleen
49 chr7:38933200-38942200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr7:38933800-38936400 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015