The 2.0 version of rSNPBase

Variant report

Variant rs2392607
Chromosome Location chr7:38930380-38930381
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38879800-38938000 Weak transcription Right Ventricle heart
2 chr7:38886200-38947800 Weak transcription Stomach Smooth Muscle stomach
3 chr7:38889400-38948200 Weak transcription Gastric stomach
4 chr7:38889600-38932600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr7:38903800-38939600 Weak transcription A549 lung
6 chr7:38903800-38947000 Weak transcription Small Intestine intestine
7 chr7:38905600-38937800 Weak transcription Colonic Mucosa Colon
8 chr7:38906000-38947800 Weak transcription H1 Cell Line embryonic stem cell
9 chr7:38908000-38941000 Weak transcription Colon Smooth Muscle Colon
10 chr7:38908200-38932800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr7:38908200-38933800 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr7:38908200-38935000 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr7:38908200-38935400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr7:38908200-38935400 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr7:38908200-38938600 Weak transcription Rectal Smooth Muscle rectum
16 chr7:38908600-38935200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr7:38908800-38932600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr7:38908800-38934200 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr7:38908800-38935400 Weak transcription Muscle Satellite Cultured Cells --
20 chr7:38908800-38943000 Weak transcription Esophagus oesophagus
21 chr7:38908800-38947800 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr7:38908800-38948000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr7:38909000-38933800 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr7:38909000-38934200 Weak transcription Duodenum Mucosa Duodenum
25 chr7:38909000-38947800 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr7:38911800-38948200 Weak transcription Aorta Aorta
27 chr7:38912000-38932800 Weak transcription Spleen Spleen
28 chr7:38914000-38934200 Weak transcription Liver Liver
29 chr7:38914200-38935000 Weak transcription Dnd41 blood
30 chr7:38916600-38941600 Weak transcription Placenta Amnion Placenta Amnion
31 chr7:38916800-38948200 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr7:38917600-38934000 Weak transcription Ovary ovary
33 chr7:38918800-38934200 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr7:38918800-38948000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr7:38919000-38932800 Weak transcription Left Ventricle heart
36 chr7:38919400-38942200 Weak transcription Pancreas Pancrea
37 chr7:38920200-38934200 Weak transcription Primary B cells from peripheral blood blood
38 chr7:38920400-38940800 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr7:38920600-38935000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr7:38920600-38935000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr7:38920600-38935400 Weak transcription Brain Hippocampus Middle brain
42 chr7:38920600-38936200 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr7:38920800-38934600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr7:38920800-38942400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr7:38921000-38938000 Weak transcription Brain Anterior Caudate brain
46 chr7:38921000-38946800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr7:38921200-38935600 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr7:38921800-38947800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr7:38923600-38932400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr7:38925000-38931200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015