The 2.0 version of rSNPBase

Variant report

Variant rs10415664
Chromosome Location chr19:44650961-44650962
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44646600-44652800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr19:44646600-44653400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr19:44646800-44651400 Weak transcription Fetal Intestine Small intestine
4 chr19:44646800-44651400 Weak transcription Pancreas Pancrea
5 chr19:44646800-44651600 Weak transcription H9 Cell Line embryonic stem cell
6 chr19:44646800-44652200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr19:44646800-44652200 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr19:44646800-44652200 Weak transcription Small Intestine intestine
9 chr19:44646800-44652800 Weak transcription Placenta Amnion Placenta Amnion
10 chr19:44646800-44653800 Weak transcription H1 Cell Line embryonic stem cell
11 chr19:44646800-44656600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:44646800-44657800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr19:44646800-44660200 Weak transcription Stomach Mucosa stomach
14 chr19:44647000-44652000 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr19:44647000-44652200 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr19:44647000-44652200 Weak transcription Brain Angular Gyrus brain
17 chr19:44647000-44652200 Weak transcription Fetal Kidney kidney
18 chr19:44647000-44652200 Weak transcription Fetal Lung lung
19 chr19:44647000-44652400 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr19:44647000-44652400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr19:44647000-44654200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr19:44647000-44655600 Weak transcription HUVEC blood vessel
23 chr19:44647000-44660200 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr19:44647000-44660200 Weak transcription Hela-S3 cervix
25 chr19:44647000-44660400 Weak transcription Fetal Heart heart
26 chr19:44647400-44652400 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr19:44647600-44655800 Weak transcription Fetal Brain Male brain
28 chr19:44647800-44668400 ZNF genes & repeats Liver Liver
29 chr19:44648200-44651000 Strong transcription Osteobl bone
30 chr19:44648200-44652200 Strong transcription Duodenum Mucosa Duodenum
31 chr19:44648200-44652400 Strong transcription Duodenum Smooth Muscle Duodenum
32 chr19:44648200-44656400 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr19:44648200-44657600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr19:44648200-44658200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr19:44648200-44660000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr19:44648400-44652200 Strong transcription Adipose Nuclei Adipose
37 chr19:44648400-44652200 Strong transcription Ovary ovary
38 chr19:44648400-44654600 Strong transcription Aorta Aorta
39 chr19:44648400-44654600 Strong transcription Skeletal Muscle Female skeletal muscle
40 chr19:44648400-44656000 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr19:44648400-44656000 Strong transcription Rectal Mucosa Donor 29 rectum
42 chr19:44648400-44656000 Strong transcription Skeletal Muscle Male skeletal muscle
43 chr19:44648400-44656400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr19:44648400-44657200 Strong transcription Brain Germinal Matrix brain
45 chr19:44648400-44658000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
46 chr19:44648400-44658800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr19:44648400-44658800 Strong transcription Fetal Muscle Leg muscle
48 chr19:44648400-44659400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr19:44648400-44660000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr19:44648400-44660000 Strong transcription Placenta Placenta

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Last update: Aug 31, 2015