The 2.0 version of rSNPBase

Variant report

Variant rs10416292
Chromosome Location chr19:44713135-44713136
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44710400-44713400 Active TSS Duodenum Smooth Muscle Duodenum
2 chr19:44711200-44713200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:44711200-44713200 Active TSS Rectal Mucosa Donor 31 rectum
4 chr19:44711200-44713200 Active TSS Skeletal Muscle Male skeletal muscle
5 chr19:44711200-44713200 Active TSS K562 blood
6 chr19:44712200-44716000 Weak transcription Primary B cells from peripheral blood blood
7 chr19:44712200-44716000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr19:44712200-44716000 Weak transcription Fetal Muscle Trunk muscle
9 chr19:44712200-44716000 Weak transcription Left Ventricle heart
10 chr19:44712200-44716200 Weak transcription H9 Cell Line embryonic stem cell
11 chr19:44712200-44716200 Weak transcription Primary T cells fromperipheralblood blood
12 chr19:44712200-44716200 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr19:44712200-44716200 Weak transcription Brain Substantia Nigra brain
14 chr19:44712200-44716600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr19:44712400-44715800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr19:44712400-44716000 Weak transcription Brain Hippocampus Middle brain
17 chr19:44712400-44716200 Weak transcription Primary hematopoietic stem cells blood
18 chr19:44712400-44716200 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr19:44712400-44716200 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr19:44712400-44716200 Weak transcription Duodenum Mucosa Duodenum
21 chr19:44712400-44716200 Weak transcription Fetal Brain Female brain
22 chr19:44712400-44716200 Weak transcription HUVEC blood vessel
23 chr19:44712600-44713200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
24 chr19:44712600-44713200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr19:44712600-44716000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr19:44712600-44716000 Weak transcription Fetal Intestine Large intestine
27 chr19:44712600-44716000 Weak transcription Fetal Intestine Small intestine
28 chr19:44712600-44716200 Weak transcription Brain Germinal Matrix brain
29 chr19:44712600-44716200 Weak transcription NHEK skin
30 chr19:44712800-44713200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr19:44712800-44715800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr19:44712800-44716000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr19:44712800-44716000 Weak transcription Fetal Brain Male brain
34 chr19:44712800-44716200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr19:44712800-44716200 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr19:44712800-44716200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr19:44712800-44716200 Weak transcription Muscle Satellite Cultured Cells --
38 chr19:44712800-44716200 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr19:44712800-44716200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr19:44712800-44716200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr19:44712800-44716200 Weak transcription Brain Cingulate Gyrus brain
42 chr19:44712800-44716200 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr19:44712800-44716200 Weak transcription Rectal Smooth Muscle rectum
44 chr19:44712800-44716200 Weak transcription Hela-S3 cervix
45 chr19:44712800-44716200 Weak transcription Osteobl bone
46 chr19:44712800-44716400 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr19:44713000-44713200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
48 chr19:44713000-44713200 Flanking Active TSS Liver Liver
49 chr19:44713000-44713200 Enhancers Dnd41 blood
50 chr19:44713000-44713400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015