Variant report

Variant	rs3810137
Chromosome Location	chr19:44740602-44740603
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:44739640..44742432-chr19:44813683..44816580,2	K562	blood:

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10153465	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10153499	0.93[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs10405281	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10406980	0.86[CHB][hapmap];0.90[JPT][hapmap];0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10408004	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10409884	0.90[JPT][hapmap];0.83[YRI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10409954	0.81[AMR][1000 genomes]
rs10410283	0.92[JPT][hapmap];0.94[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10412910	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10415563	0.84[JPT][hapmap];0.86[AMR][1000 genomes]
rs10416230	0.92[JPT][hapmap];0.85[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10416292	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10417178	0.92[JPT][hapmap];0.93[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10420465	0.92[JPT][hapmap];0.85[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10422555	0.86[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs10422609	0.92[JPT][hapmap];0.80[ASN][1000 genomes]
rs10424371	0.80[ASN][1000 genomes]
rs10425146	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10425881	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10426314	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1106562	0.92[JPT][hapmap];0.85[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11140	0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11878679	0.86[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs11878720	0.88[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs11879588	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16959114	0.83[JPT][hapmap]
rs16978794	0.92[JPT][hapmap];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs16978836	0.92[JPT][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1881748	0.90[JPT][hapmap];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2141524	0.92[JPT][hapmap];0.85[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2141525	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2178342	0.92[JPT][hapmap];0.85[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs28422007	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3803932	0.90[JPT][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4802212	0.91[JPT][hapmap];0.84[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4802213	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4802215	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4803685	0.83[JPT][hapmap];0.83[YRI][hapmap];0.80[ASN][1000 genomes]
rs4803686	0.93[YRI][hapmap];0.80[ASN][1000 genomes]
rs4803688	0.90[JPT][hapmap];0.81[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs4803692	0.85[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4803693	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs55732275	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs57418162	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs57451052	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs58358390	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs59576456	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs59774711	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60379253	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60747128	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6509147	0.89[JPT][hapmap];0.80[ASN][1000 genomes]
rs6509148	0.86[YRI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7248797	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7249992	0.92[JPT][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7254034	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7254458	0.86[CHB][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7260367	0.90[JPT][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73564059	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73564095	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs8107252	0.92[JPT][hapmap];0.85[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs8108504	0.83[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs8108908	0.92[JPT][hapmap];0.93[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs922063	0.86[CHB][hapmap];0.90[JPT][hapmap];0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs922064	0.86[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9304639	0.83[JPT][hapmap];0.90[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44729800-44741000	ZNF genes & repeats	Lung	lung
2	chr19:44729800-44768600	ZNF genes & repeats	Adipose Nuclei	Adipose
3	chr19:44730000-44741200	ZNF genes & repeats	Ovary	ovary
4	chr19:44730000-44741400	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
5	chr19:44730000-44742000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
6	chr19:44730000-44743600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr19:44730000-44745000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr19:44730000-44775600	ZNF genes & repeats	Liver	Liver
9	chr19:44730200-44741200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr19:44730200-44741200	ZNF genes & repeats	Aorta	Aorta
11	chr19:44730200-44743000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
12	chr19:44730200-44743400	ZNF genes & repeats	Fetal Lung	lung
13	chr19:44730200-44754600	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
14	chr19:44730400-44743400	Strong transcription	Cortex derived primary cultured neurospheres	brain
15	chr19:44730800-44741000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr19:44731000-44740800	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
17	chr19:44731000-44742000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr19:44731000-44744400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
19	chr19:44731200-44741400	ZNF genes & repeats	Primary neutrophils fromperipheralblood	blood
20	chr19:44731400-44741400	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
21	chr19:44731400-44742000	ZNF genes & repeats	Fetal Intestine Small	intestine
22	chr19:44731600-44741000	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
23	chr19:44731600-44741000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
24	chr19:44731600-44741200	Strong transcription	Placenta Amnion	Placenta Amnion
25	chr19:44731600-44741200	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
26	chr19:44731800-44741000	ZNF genes & repeats	Primary mononuclear cells fromperipheralblood	Blood
27	chr19:44731800-44741000	ZNF genes & repeats	Small Intestine	intestine
28	chr19:44731800-44741200	Strong transcription	Placenta	Placenta
29	chr19:44731800-44741200	Strong transcription	Fetal Thymus	thymus
30	chr19:44731800-44741400	ZNF genes & repeats	Colon Smooth Muscle	Colon
31	chr19:44731800-44744200	ZNF genes & repeats	Primary hematopoietic stem cells	blood
32	chr19:44732000-44741200	ZNF genes & repeats	Fetal Kidney	kidney
33	chr19:44732400-44741400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr19:44732600-44741400	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr19:44733800-44740800	ZNF genes & repeats	Primary T cells fromperipheralblood	blood
36	chr19:44733800-44741200	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
37	chr19:44733800-44744200	ZNF genes & repeats	A549	lung
38	chr19:44734000-44741000	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr19:44734000-44741000	ZNF genes & repeats	Spleen	Spleen
40	chr19:44734200-44741200	ZNF genes & repeats	Primary T cells from cord blood	blood
41	chr19:44735200-44741400	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
42	chr19:44735600-44741000	ZNF genes & repeats	Rectal Mucosa Donor 31	rectum
43	chr19:44735600-44741400	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
44	chr19:44735600-44742200	ZNF genes & repeats	Duodenum Mucosa	Duodenum
45	chr19:44735800-44740800	ZNF genes & repeats	Colonic Mucosa	Colon
46	chr19:44735800-44741400	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
47	chr19:44736000-44741200	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr19:44736000-44741200	ZNF genes & repeats	Stomach Smooth Muscle	stomach
49	chr19:44736200-44741000	Strong transcription	Fetal Heart	heart
50	chr19:44736200-44741000	Strong transcription	NHDF-Ad	bronchial

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