Variant report

Variant	rs922064
Chromosome Location	chr19:44732835-44732836
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:44732822..44734810-chr19:44741387..44743469,2	K562	blood:
2	chr19:44731816..44734081-chr19:44735997..44738097,2	K562	blood:

Extended variants
information (count: 74 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:74)

rs_ID	r²[population]
rs10153465	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10153499	0.93[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs10405281	0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10406980	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10408004	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10409884	1.00[ASW][hapmap];0.85[CHB][hapmap];0.82[CHD][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10409954	0.81[AMR][1000 genomes]
rs10410283	0.86[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10412910	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10415563	0.86[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs10416230	0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10416292	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10417178	0.86[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10420465	0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10422555	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs10422609	0.86[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10424371	0.81[ASN][1000 genomes]
rs10425146	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10425881	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10426314	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1106562	0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11140	1.00[ASW][hapmap];1.00[CHD][hapmap];0.90[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11878679	0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11878720	0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11879588	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16959114	0.90[JPT][hapmap]
rs16978665	0.81[JPT][hapmap]
rs16978738	0.81[JPT][hapmap]
rs16978794	0.86[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs16978836	0.86[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1881748	0.86[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.80[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2141524	0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2141525	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2178342	0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28422007	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3746322	0.81[JPT][hapmap]
rs3803932	1.00[ASW][hapmap];0.86[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.93[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3810137	0.86[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4802212	0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4802213	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4802215	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4803685	0.85[CHB][hapmap];0.90[JPT][hapmap];0.85[YRI][hapmap];0.81[ASN][1000 genomes]
rs4803686	1.00[ASW][hapmap];0.86[CHB][hapmap];0.83[CHD][hapmap];0.90[JPT][hapmap];0.93[LWK][hapmap];0.94[MKK][hapmap];0.93[YRI][hapmap];0.81[ASN][1000 genomes]
rs4803688	0.86[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4803692	1.00[CHB][hapmap];0.90[JPT][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4803693	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55732275	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57418162	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57451052	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58358390	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59576456	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59774711	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs60379253	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60747128	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6509142	0.81[JPT][hapmap]
rs6509147	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs6509148	0.87[ASW][hapmap];0.86[CHB][hapmap];0.95[LWK][hapmap];0.93[MEX][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7248797	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7249992	0.86[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7250439	0.81[JPT][hapmap]
rs7254034	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7254458	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7259777	0.81[JPT][hapmap]
rs7260367	1.00[ASW][hapmap];0.86[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.93[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7260588	0.81[JPT][hapmap]
rs73564059	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73564095	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8107252	0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8108504	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs8108908	0.86[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8111388	0.90[JPT][hapmap]
rs8111562	0.81[JPT][hapmap]
rs922063	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9304639	0.90[JPT][hapmap];0.89[YRI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44717400-44739000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr19:44717600-44739600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr19:44718200-44738800	Weak transcription	Hela-S3	cervix
4	chr19:44718400-44736400	Weak transcription	HUVEC	blood vessel
5	chr19:44723600-44738000	Weak transcription	NHEK	skin
6	chr19:44723800-44735800	Weak transcription	NH-A	brain
7	chr19:44729800-44733600	ZNF genes & repeats	Brain Germinal Matrix	brain
8	chr19:44729800-44734800	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr19:44729800-44735000	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
10	chr19:44729800-44735800	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
11	chr19:44729800-44741000	ZNF genes & repeats	Lung	lung
12	chr19:44729800-44768600	ZNF genes & repeats	Adipose Nuclei	Adipose
13	chr19:44730000-44733000	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
14	chr19:44730000-44733200	ZNF genes & repeats	Duodenum Mucosa	Duodenum
15	chr19:44730000-44735000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr19:44730000-44737000	ZNF genes & repeats	Fetal Muscle Leg	muscle
17	chr19:44730000-44741200	ZNF genes & repeats	Ovary	ovary
18	chr19:44730000-44741400	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
19	chr19:44730000-44742000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
20	chr19:44730000-44743600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr19:44730000-44745000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr19:44730000-44775600	ZNF genes & repeats	Liver	Liver
23	chr19:44730200-44733200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
24	chr19:44730200-44733200	ZNF genes & repeats	Fetal Muscle Trunk	muscle
25	chr19:44730200-44733400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr19:44730200-44736400	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr19:44730200-44736400	ZNF genes & repeats	Fetal Brain Female	brain
28	chr19:44730200-44739600	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr19:44730200-44741200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr19:44730200-44741200	ZNF genes & repeats	Aorta	Aorta
31	chr19:44730200-44743000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
32	chr19:44730200-44743400	ZNF genes & repeats	Fetal Lung	lung
33	chr19:44730200-44754600	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
34	chr19:44730400-44734400	Strong transcription	Skeletal Muscle Female	skeletal muscle
35	chr19:44730400-44735200	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
36	chr19:44730400-44743400	Strong transcription	Cortex derived primary cultured neurospheres	brain
37	chr19:44730800-44739800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr19:44730800-44741000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr19:44731000-44733200	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr19:44731000-44734000	Strong transcription	NHDF-Ad	bronchial
41	chr19:44731000-44734400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr19:44731000-44734800	ZNF genes & repeats	Rectal Mucosa Donor 29	rectum
43	chr19:44731000-44739400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr19:44731000-44740800	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
45	chr19:44731000-44742000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr19:44731000-44744400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
47	chr19:44731200-44733400	ZNF genes & repeats	GM12878-XiMat	blood
48	chr19:44731200-44739800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
49	chr19:44731200-44741400	ZNF genes & repeats	Primary neutrophils fromperipheralblood	blood
50	chr19:44731400-44734200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell

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