Variant report

Variant	rs1043254
Chromosome Location	chr14:69708241-69708242
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1013762	1.00[CHB][hapmap]
rs10148349	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[TSI][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17106817	0.86[CEU][hapmap]
rs1710990	1.00[CHB][hapmap]
rs3173	1.00[CHB][hapmap]
rs4902695	1.00[CHB][hapmap]
rs6573878	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8004546	1.00[CHB][hapmap]

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69660600-69717200	Weak transcription	Hela-S3	cervix
2	chr14:69677000-69709600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr14:69678400-69709200	Weak transcription	NHDF-Ad	bronchial
4	chr14:69678600-69709200	Weak transcription	A549	lung
5	chr14:69692800-69708400	Weak transcription	Stomach Mucosa	stomach
6	chr14:69694000-69711200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr14:69694000-69721400	Weak transcription	HUVEC	blood vessel
8	chr14:69694000-69726000	Weak transcription	Right Atrium	heart
9	chr14:69695200-69708800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
10	chr14:69695600-69708800	Strong transcription	Liver	Liver
11	chr14:69696400-69708800	Strong transcription	Stomach Smooth Muscle	stomach
12	chr14:69696600-69709600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr14:69698600-69709200	Strong transcription	Brain Angular Gyrus	brain
14	chr14:69698800-69709200	Strong transcription	Brain Inferior Temporal Lobe	brain
15	chr14:69700200-69709400	Strong transcription	Fetal Stomach	stomach
16	chr14:69700600-69709400	Strong transcription	Fetal Muscle Leg	muscle
17	chr14:69700800-69708600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr14:69700800-69708600	Strong transcription	Adipose Nuclei	Adipose
19	chr14:69700800-69709000	Strong transcription	Primary T helper cells fromperipheralblood	blood
20	chr14:69701000-69708600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr14:69701000-69708600	Strong transcription	Primary T cells from cord blood	blood
22	chr14:69701000-69709400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr14:69701000-69709400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr14:69701200-69708800	Strong transcription	HUES48 Cell Line	embryonic stem cell
25	chr14:69701200-69709200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr14:69701200-69709400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr14:69701400-69708400	Strong transcription	Skeletal Muscle Male	skeletal muscle
28	chr14:69701400-69708400	Strong transcription	Monocytes-CD14+_RO01746	blood
29	chr14:69701400-69708600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr14:69701400-69708600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
31	chr14:69701400-69708600	Strong transcription	Brain Cingulate Gyrus	brain
32	chr14:69701400-69708800	Strong transcription	Duodenum Smooth Muscle	Duodenum
33	chr14:69701400-69709200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr14:69701400-69709200	Strong transcription	Primary T cells fromperipheralblood	blood
35	chr14:69701400-69709200	Strong transcription	Brain Germinal Matrix	brain
36	chr14:69701400-69709200	Strong transcription	Fetal Muscle Trunk	muscle
37	chr14:69701400-69709200	Strong transcription	Sigmoid Colon	Sigmoid Colon
38	chr14:69701400-69709400	Strong transcription	Esophagus	oesophagus
39	chr14:69701600-69708400	Strong transcription	Fetal Brain Female	brain
40	chr14:69701600-69708400	Strong transcription	Rectal Mucosa Donor 29	rectum
41	chr14:69701600-69708600	Strong transcription	Skeletal Muscle Female	skeletal muscle
42	chr14:69701600-69708800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
43	chr14:69701600-69708800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr14:69701600-69708800	Strong transcription	Brain Hippocampus Middle	brain
45	chr14:69701600-69708800	Strong transcription	Rectal Smooth Muscle	rectum
46	chr14:69701600-69709200	Strong transcription	HUES6 Cell Line	embryonic stem cell
47	chr14:69701600-69714000	Weak transcription	HSMM	muscle
48	chr14:69702400-69708800	Strong transcription	Gastric	stomach
49	chr14:69702600-69708600	Strong transcription	Primary T helper cells PMA-I stimulated	--
50	chr14:69702600-69708600	Strong transcription	Aorta	Aorta

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