Variant report

Variant rs10502506
Chromosome Location chr18:25576002-25576003
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25531200-25593600 Weak transcription Fetal Kidney kidney
2 chr18:25536400-25578200 Weak transcription Fetal Brain Male brain
3 chr18:25540800-25576400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr18:25545600-25588600 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr18:25553000-25593600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr18:25556200-25586800 Weak transcription Spleen Spleen
7 chr18:25556200-25592800 Weak transcription Aorta Aorta
8 chr18:25556200-25595800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr18:25556400-25576400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr18:25556400-25584600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr18:25558800-25583600 Weak transcription Right Ventricle heart
12 chr18:25564800-25591400 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr18:25565000-25592800 Weak transcription A549 lung
14 chr18:25565200-25580000 Weak transcription Ovary ovary
15 chr18:25565200-25591800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr18:25566400-25584600 Weak transcription H9 Cell Line embryonic stem cell
17 chr18:25566600-25578400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr18:25571600-25588800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr18:25572000-25580600 Weak transcription Fetal Intestine Large intestine
20 chr18:25572800-25576400 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr18:25572800-25580800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr18:25572800-25589800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr18:25573000-25590000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr18:25573600-25576600 Enhancers Fetal Heart heart
25 chr18:25573600-25578000 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr18:25573600-25578200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr18:25573600-25578200 Weak transcription Dnd41 blood
28 chr18:25573600-25578400 Weak transcription HepG2 liver
29 chr18:25573600-25582400 Weak transcription Brain Substantia Nigra brain
30 chr18:25573600-25591200 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr18:25573600-25593400 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr18:25573800-25576600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr18:25573800-25578200 Weak transcription Brain Germinal Matrix brain
34 chr18:25574000-25576200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr18:25574000-25576200 Weak transcription HUVEC blood vessel
36 chr18:25574000-25576600 Weak transcription HSMM muscle
37 chr18:25574000-25579200 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr18:25574200-25578200 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr18:25574400-25576400 Weak transcription Muscle Satellite Cultured Cells --
40 chr18:25574400-25576400 Weak transcription Liver Liver
41 chr18:25574400-25577800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr18:25574800-25578200 Weak transcription Fetal Brain Female brain
43 chr18:25574800-25578400 Weak transcription Brain Anterior Caudate brain
44 chr18:25574800-25582000 Weak transcription Brain Cingulate Gyrus brain
45 chr18:25574800-25582800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr18:25574800-25584800 Weak transcription HSMMtube muscle
47 chr18:25575000-25576200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
48 chr18:25575000-25576400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr18:25575000-25576400 Weak transcription NH-A brain
50 chr18:25575000-25578200 Weak transcription Brain Hippocampus Middle brain

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