Variant report

Variant	rs1060407
Chromosome Location	chr3:47958037-47958038
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:47952765..47954649-chr3:47957193..47959819,2	K562	blood:

Extended variants
information (count: 152 )
Associated
traits (count: 16 )

rSNPs within LD-proxies of this variant (count:140)

rs_ID	r²[population]
rs1013431	0.96[CEU][hapmap];0.83[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes]
rs1061003	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11130148	0.89[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs11130150	0.81[ASN][1000 genomes]
rs11130152	0.96[CEU][hapmap];0.83[CHB][hapmap];0.94[JPT][hapmap];0.86[EUR][1000 genomes]
rs11130154	0.89[EUR][1000 genomes]
rs11130155	0.82[TSI][hapmap]
rs1137524	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11707679	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11712464	0.89[CEU][hapmap];0.88[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.85[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap]
rs11720151	0.92[CEU][hapmap];0.86[CHD][hapmap];0.81[GIH][hapmap];0.94[JPT][hapmap];0.92[TSI][hapmap]
rs12486714	0.92[CEU][hapmap];0.93[JPT][hapmap]
rs12495204	0.85[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs13072132	0.81[CEU][hapmap]
rs13074973	0.96[CEU][hapmap];0.83[CHB][hapmap];0.94[JPT][hapmap];0.89[EUR][1000 genomes]
rs13075457	0.86[EUR][1000 genomes]
rs13075795	0.87[EUR][1000 genomes]
rs13077230	0.81[ASN][1000 genomes]
rs13079407	0.91[CEU][hapmap]
rs13081701	0.86[EUR][1000 genomes]
rs13085054	0.92[CEU][hapmap];0.89[CHD][hapmap];0.81[GIH][hapmap];0.94[JPT][hapmap];0.89[TSI][hapmap]
rs13091913	0.88[CEU][hapmap];0.94[JPT][hapmap];0.94[TSI][hapmap]
rs13093830	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13094264	0.88[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs1486915	0.88[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs1486916	1.00[YRI][hapmap]
rs1530646	0.89[EUR][1000 genomes]
rs1550914	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1665982	0.91[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs1684942	0.83[CHB][hapmap];0.93[JPT][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17079785	0.89[CEU][hapmap];0.80[CHD][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs17290490	0.89[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.81[ASN][1000 genomes]
rs184388	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2053767	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2121754	0.96[CEU][hapmap];0.83[CHB][hapmap];0.94[JPT][hapmap];0.89[EUR][1000 genomes]
rs2166770	0.96[CEU][hapmap];0.83[CHB][hapmap];0.86[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2166772	0.89[EUR][1000 genomes]
rs2351248	0.82[CHB][hapmap];0.88[CHD][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs2631721	0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs28637561	0.89[EUR][1000 genomes]
rs2882668	0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs319680	0.82[EUR][1000 genomes]
rs319681	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs319682	1.00[CEU][hapmap];0.83[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.81[MEX][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs319683	0.83[YRI][hapmap]
rs319684	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs319685	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs319686	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs319687	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs319688	0.94[EUR][1000 genomes]
rs319689	0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs319690	0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs319691	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs319692	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs319693	0.89[CEU][hapmap];0.94[CHB][hapmap];0.88[CHD][hapmap];0.94[JPT][hapmap];0.84[LWK][hapmap];0.89[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs319694	0.94[JPT][hapmap];0.83[TSI][hapmap];0.81[ASN][1000 genomes]
rs319695	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.83[TSI][hapmap];0.91[ASN][1000 genomes]
rs319696	1.00[CEU][hapmap];0.83[CHB][hapmap];0.94[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34025851	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34448818	0.81[CEU][hapmap]
rs34675858	1.00[YRI][hapmap]
rs34750113	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35199727	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35314534	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35582375	0.81[ASN][1000 genomes]
rs35689209	0.84[EUR][1000 genomes]
rs35943823	0.86[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs3732529	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3772399	0.89[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs3888	0.89[CEU][hapmap];0.83[CHB][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs3915654	0.89[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs4293721	0.89[EUR][1000 genomes]
rs4296617	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4392441	0.87[EUR][1000 genomes]
rs4599334	0.96[CEU][hapmap];0.83[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.94[TSI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4858810	0.92[CEU][hapmap]
rs4858851	0.89[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs4858860	0.89[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs4858863	0.87[ASW][hapmap];0.89[CEU][hapmap];0.94[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.85[MEX][hapmap];0.97[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs4858871	1.00[CEU][hapmap];0.83[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.81[MEX][hapmap];1.00[TSI][hapmap];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4858876	0.84[EUR][1000 genomes]
rs4858880	0.83[EUR][1000 genomes]
rs4858881	0.91[CEU][hapmap];0.82[EUR][1000 genomes]
rs4858887	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs5012971	0.87[EUR][1000 genomes]
rs60446735	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62260764	0.82[EUR][1000 genomes]
rs6442082	0.88[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs6442090	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6442091	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6442094	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6442096	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6442101	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];0.92[YRI][hapmap];0.83[EUR][1000 genomes]
rs6442102	0.92[CEU][hapmap];0.94[JPT][hapmap]
rs6763824	0.88[CEU][hapmap]
rs6770467	0.89[EUR][1000 genomes]
rs6770477	0.89[EUR][1000 genomes]
rs6772396	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6773208	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6776963	0.84[CEU][hapmap];0.94[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.85[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap]
rs6777632	0.88[CEU][hapmap];0.94[JPT][hapmap]
rs6783629	0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6786001	0.89[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs6791834	0.85[EUR][1000 genomes]
rs6803741	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];0.83[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6806820	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7374516	0.96[CEU][hapmap];0.83[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7426976	0.92[CEU][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.89[EUR][1000 genomes]
rs7427418	0.88[CEU][hapmap];0.86[CHD][hapmap];0.84[GIH][hapmap];0.94[TSI][hapmap];0.89[EUR][1000 genomes]
rs7429990	0.82[EUR][1000 genomes]
rs7430879	0.96[CEU][hapmap];0.83[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.89[EUR][1000 genomes]
rs7430913	1.00[CEU][hapmap];0.93[JPT][hapmap];0.89[EUR][1000 genomes]
rs7431567	0.81[AMR][1000 genomes]
rs7618758	0.89[CEU][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs7619882	0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7620736	0.85[EUR][1000 genomes]
rs7627645	0.87[EUR][1000 genomes]
rs7629850	0.87[ASW][hapmap];0.89[CEU][hapmap];0.94[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.85[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs7638103	0.89[CEU][hapmap];0.83[CHB][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap]
rs7642590	0.87[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes]
rs7645846	0.85[CEU][hapmap];0.94[JPT][hapmap]
rs7649981	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7653368	0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs777014	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs777015	1.00[CEU][hapmap];0.83[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.81[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs777017	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs796566	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs800762	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs810334	1.00[CEU][hapmap];0.83[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.81[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9681917	0.89[CEU][hapmap];0.94[JPT][hapmap];0.94[TSI][hapmap]
rs9811277	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9812875	0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9814961	0.89[EUR][1000 genomes]
rs9825114	0.87[ASW][hapmap];0.92[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MKK][hapmap];0.92[TSI][hapmap];1.00[YRI][hapmap]
rs9842649	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9846062	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9850154	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9854454	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9860485	0.86[EUR][1000 genomes]
rs9862913	0.96[CEU][hapmap];0.83[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.97[TSI][hapmap];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1006560	chr3:47867461-48037031	Strong transcription Weak transcription Flanking Active TSS Genic enhancers Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	141 gene(s)	inside rSNPs	diseases
2	nsv1011662	chr3:47891634-48019462	Strong transcription Enhancers Genic enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv536561	chr3:47891634-48019462	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
4	nsv529989	chr3:47909480-48301481	Genic enhancers Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
5	nsv1001056	chr3:47912342-48223849	Genic enhancers Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
6	esv1796001	chr3:47912703-48012797	Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	esv1826403	chr3:47912703-48012797	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
8	esv1835684	chr3:47912703-48123540	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
9	esv1827272	chr3:47912703-48260968	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
10	nsv1000817	chr3:47927730-48032401	Enhancers Genic enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
11	nsv1009243	chr3:47935331-48340448	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
12	nsv536562	chr3:47935331-48340448	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

mRNA abundance (count:16)

SNP	Gene	Cis/trans	Tissue	Source
rs1060407	SMARCC1	cis	cerebellum	SCAN
rs1060407	MRPS18AP1	cis	Thyroid	GTEx
rs1060407	NME6	cis	Esophagus Muscularis	GTEx
rs1060407	MAP4	Cis_1M	lymphoblastoid	RTeQTL
rs1060407	MRPS18AP1	cis	Nerve Tibial	GTEx
rs1060407	DHX30	Cis_1M	lymphoblastoid	RTeQTL
rs1060407	ZNF589	cis	parietal	SCAN
rs1060407	ZNF589	cis	cerebellum	SCAN
rs1060407	MRPS18AP1	cis	Muscle Skeletal	GTEx
rs1060407	ZNF445	cis	cerebellum	SCAN
rs1060407	ZNF589	cis	multi-tissue	Pritchard
rs1060407	CDC25A	cis	cerebellum	SCAN
rs1060407	MRPS18AP1	cis	Artery Tibial	GTEx
rs1060407	ZNF589	cis	Whole Blood	GTEx
rs1060407	HYAL2	cis	cerebellum	SCAN
rs1060407	ZNF589	cis	Nerve Tibial	GTEx

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:47910200-47978000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
2	chr3:47932000-47969200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr3:47941400-47968000	Weak transcription	Stomach Mucosa	stomach
4	chr3:47942600-47963600	Strong transcription	Fetal Muscle Leg	muscle
5	chr3:47947600-47959600	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr3:47948400-47959400	Strong transcription	Fetal Intestine Large	intestine
7	chr3:47948600-47970800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr3:47948800-47959400	Strong transcription	Duodenum Mucosa	Duodenum
9	chr3:47949000-47958800	Strong transcription	Primary B cells from cord blood	blood
10	chr3:47949000-47959600	Strong transcription	Adipose Nuclei	Adipose
11	chr3:47949000-47960800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr3:47949600-47963200	Strong transcription	Fetal Muscle Trunk	muscle
13	chr3:47949600-47970000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr3:47949800-47958800	Strong transcription	GM12878-XiMat	blood
15	chr3:47950400-47959200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr3:47950400-47959600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
17	chr3:47950400-47963800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
18	chr3:47950600-47963400	Strong transcription	Fetal Thymus	thymus
19	chr3:47951000-47959400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr3:47951200-47959200	Strong transcription	Primary T cells fromperipheralblood	blood
21	chr3:47951200-47959400	Strong transcription	Placenta	Placenta
22	chr3:47951200-47959400	Strong transcription	Rectal Mucosa Donor 31	rectum
23	chr3:47951200-47963400	Strong transcription	Rectal Mucosa Donor 29	rectum
24	chr3:47951600-47963800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr3:47952000-47958800	Strong transcription	Liver	Liver
26	chr3:47952000-47963400	Strong transcription	Primary B cells from peripheral blood	blood
27	chr3:47952000-47972400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
28	chr3:47952400-47959800	Weak transcription	Pancreatic Islets	Pancreatic Islet
29	chr3:47952600-47959400	Strong transcription	Colon Smooth Muscle	Colon
30	chr3:47952600-47959600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr3:47952600-47960800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr3:47952600-47979200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr3:47952800-47959200	Strong transcription	HSMMtube	muscle
34	chr3:47952800-47959400	Strong transcription	Primary T helper cells fromperipheralblood	blood
35	chr3:47952800-47960400	Strong transcription	Primary monocytes fromperipheralblood	blood
36	chr3:47952800-47969200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
37	chr3:47953000-47960600	Strong transcription	HUES6 Cell Line	embryonic stem cell
38	chr3:47953000-47961200	Strong transcription	HUES48 Cell Line	embryonic stem cell
39	chr3:47953000-47964000	Strong transcription	HUES64 Cell Line	embryonic stem cell
40	chr3:47953200-47969800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr3:47953600-47958800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
42	chr3:47953600-47960400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr3:47953600-47961600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr3:47953600-47963400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr3:47953800-47963400	Strong transcription	HSMM	muscle
46	chr3:47953800-47970200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr3:47953800-47971600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr3:47954000-47959400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr3:47954000-47960400	Strong transcription	HMEC	breast
50	chr3:47954000-47969400	Weak transcription	Psoas Muscle	Psoas

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