Variant report

Variant rs11130154
Chromosome Location chr3:48069242-48069243
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:48043800-48075200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:48043800-48075200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr3:48051200-48128000 Weak transcription Primary B cells from cord blood blood
4 chr3:48053600-48075200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr3:48055600-48075200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr3:48056200-48076000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr3:48058400-48082400 Weak transcription Spleen Spleen
8 chr3:48058800-48075600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr3:48058800-48080600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr3:48059200-48080600 Weak transcription Primary hematopoietic stem cells blood
11 chr3:48059400-48075200 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr3:48059600-48128800 Weak transcription Primary T cells from cord blood blood
13 chr3:48059800-48090800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr3:48059800-48093600 Weak transcription Gastric stomach
15 chr3:48060000-48075400 Weak transcription Hela-S3 cervix
16 chr3:48060800-48088800 Weak transcription Fetal Muscle Trunk muscle
17 chr3:48060800-48089400 Weak transcription Dnd41 blood
18 chr3:48062000-48073200 Weak transcription K562 blood
19 chr3:48062400-48074800 Weak transcription HSMM muscle
20 chr3:48063800-48073200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr3:48064400-48071800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr3:48064400-48128800 Weak transcription Esophagus oesophagus
23 chr3:48064600-48074800 Weak transcription GM12878-XiMat blood
24 chr3:48065000-48074600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr3:48065200-48074600 Weak transcription Adipose Nuclei Adipose
26 chr3:48065200-48075200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr3:48065200-48080600 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr3:48065400-48074600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr3:48065400-48075200 Weak transcription HSMMtube muscle
30 chr3:48065600-48070400 Weak transcription Fetal Intestine Large intestine
31 chr3:48066200-48069400 Weak transcription Stomach Smooth Muscle stomach
32 chr3:48066600-48071800 Weak transcription Rectal Smooth Muscle rectum
33 chr3:48066600-48074200 Weak transcription NHDF-Ad bronchial
34 chr3:48067200-48075200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr3:48067600-48069400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr3:48067600-48069600 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr3:48067600-48069800 Enhancers Skeletal Muscle Male skeletal muscle
38 chr3:48068000-48077600 Weak transcription Fetal Lung lung
39 chr3:48068200-48069600 Enhancers Skeletal Muscle Female skeletal muscle
40 chr3:48068200-48069800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr3:48068200-48069800 Enhancers Fetal Heart heart
42 chr3:48068400-48069400 Enhancers Cortex derived primary cultured neurospheres brain
43 chr3:48068400-48069400 Enhancers Liver Liver
44 chr3:48068400-48069400 Enhancers Brain Hippocampus Middle brain
45 chr3:48068400-48069600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr3:48068400-48069600 Enhancers Psoas Muscle Psoas
47 chr3:48068400-48069600 Enhancers HMEC breast
48 chr3:48068400-48069800 Enhancers Fetal Muscle Leg muscle
49 chr3:48068600-48069600 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr3:48068800-48069400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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