Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:9587725..9589821-chr11:9653382..9655563,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10743115	0.90[EUR][1000 genomes]
rs10770052	0.80[ASN][1000 genomes]
rs10770053	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10840276	0.89[ASN][1000 genomes]
rs10840279	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11042452	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11042453	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11042454	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12361442	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1865558	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2060477	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2082807	0.83[ASN][1000 genomes]
rs4910483	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7105378	0.82[EUR][1000 genomes]
rs7109585	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7118466	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7118581	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs715333	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs737617	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7950021	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv896986	chr11:9636854-9679145	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv933855	chr11:9645441-10130519	Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
3	nsv1053369	chr11:9647837-9876054	Genic enhancers Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10743114	SWAP70	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:9647800-9654800	Weak transcription	Primary B cells from cord blood	blood
2	chr11:9651000-9658400	Weak transcription	Spleen	Spleen
3	chr11:9653000-9655200	Weak transcription	Primary B cells from peripheral blood	blood
4	chr11:9653600-9655000	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr11:9653600-9655200	Weak transcription	Primary monocytes fromperipheralblood	blood

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