Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:118762342..118765000-chr10:118775190..118777306,2	K562	blood:

Variant related genes	Relation type
ENSG00000187164	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10787734	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs10787755	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11197905	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1898345	1.00[ASN][1000 genomes]
rs1905537	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2576438	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2901108	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3981233	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4752022	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4752023	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4752024	1.00[AMR][1000 genomes]
rs4752029	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6585423	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7076113	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7079998	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7085068	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7101129	1.00[ASN][1000 genomes]
rs7903949	1.00[ASN][1000 genomes]
rs7904342	1.00[ASN][1000 genomes]
rs7906476	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs9421253	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755506	chr10:118748764-118800107	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be: