The 2.0 version of rSNPBase

Variant report

Variant rs1074957
Chromosome Location chr12:62664266-62664267
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62655400-62685600 Weak transcription HSMM muscle
2 chr12:62656000-62664800 Weak transcription Fetal Stomach stomach
3 chr12:62656000-62665400 Weak transcription Brain Angular Gyrus brain
4 chr12:62656000-62668200 Weak transcription Right Atrium heart
5 chr12:62656400-62669600 Enhancers Liver Liver
6 chr12:62656400-62679400 Weak transcription Brain Anterior Caudate brain
7 chr12:62656600-62668400 Weak transcription Fetal Brain Female brain
8 chr12:62656600-62685600 Weak transcription Aorta Aorta
9 chr12:62656600-62685600 Weak transcription Pancreas Pancrea
10 chr12:62656800-62675400 Weak transcription Brain Hippocampus Middle brain
11 chr12:62657400-62666600 Weak transcription HepG2 liver
12 chr12:62658400-62669400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr12:62658400-62671200 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr12:62658400-62671400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr12:62659000-62671800 Enhancers Primary T helper cells fromperipheralblood blood
16 chr12:62659200-62664400 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr12:62659200-62669800 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr12:62659400-62671400 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr12:62659600-62664600 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr12:62659600-62667800 Weak transcription Left Ventricle heart
21 chr12:62659800-62664600 Enhancers Primary T cells from cord blood blood
22 chr12:62660800-62665000 Enhancers Primary monocytes fromperipheralblood blood
23 chr12:62661000-62664800 Enhancers Hela-S3 cervix
24 chr12:62661200-62664600 Enhancers Muscle Satellite Cultured Cells --
25 chr12:62661200-62665000 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr12:62661400-62664600 Enhancers Primary T helper cells PMA-I stimulated --
27 chr12:62661400-62673600 Weak transcription Brain Cingulate Gyrus brain
28 chr12:62661600-62665400 Weak transcription Rectal Smooth Muscle rectum
29 chr12:62661600-62667800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr12:62661600-62668600 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr12:62661600-62676000 Weak transcription Fetal Thymus thymus
32 chr12:62661600-62682800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr12:62661800-62666800 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr12:62662200-62676000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr12:62662400-62664400 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr12:62662400-62666600 Weak transcription NHLF lung
37 chr12:62662600-62666800 Weak transcription Primary B cells from peripheral blood blood
38 chr12:62662800-62669600 Weak transcription Duodenum Mucosa Duodenum
39 chr12:62663000-62664400 Weak transcription Primary B cells from cord blood blood
40 chr12:62663000-62666400 Weak transcription A549 lung
41 chr12:62663000-62668200 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr12:62663000-62685600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr12:62663200-62664400 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr12:62663200-62665600 Enhancers Dnd41 blood
45 chr12:62663200-62669400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr12:62663200-62670800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr12:62663200-62671600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr12:62663200-62684800 Weak transcription NHEK skin
49 chr12:62663400-62664400 Weak transcription HMEC breast
50 chr12:62663400-62667400 Weak transcription Osteobl bone

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Last update: Aug 31, 2015