The 2.0 version of rSNPBase

Variant report

Variant rs73135240
Chromosome Location chr12:62661522-62661523
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62655000-62663400 Weak transcription Lung lung
2 chr12:62655400-62685600 Weak transcription HSMM muscle
3 chr12:62656000-62662000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr12:62656000-62663200 Weak transcription Placenta Placenta
5 chr12:62656000-62664800 Weak transcription Fetal Stomach stomach
6 chr12:62656000-62665400 Weak transcription Brain Angular Gyrus brain
7 chr12:62656000-62668200 Weak transcription Right Atrium heart
8 chr12:62656400-62669600 Enhancers Liver Liver
9 chr12:62656400-62679400 Weak transcription Brain Anterior Caudate brain
10 chr12:62656600-62662200 Weak transcription Adipose Nuclei Adipose
11 chr12:62656600-62663200 Weak transcription Ovary ovary
12 chr12:62656600-62664000 Enhancers Primary neutrophils fromperipheralblood blood
13 chr12:62656600-62668400 Weak transcription Fetal Brain Female brain
14 chr12:62656600-62685600 Weak transcription Aorta Aorta
15 chr12:62656600-62685600 Weak transcription Pancreas Pancrea
16 chr12:62656800-62675400 Weak transcription Brain Hippocampus Middle brain
17 chr12:62657400-62666600 Weak transcription HepG2 liver
18 chr12:62658000-62663200 Weak transcription Thymus Thymus
19 chr12:62658400-62669400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr12:62658400-62671200 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr12:62658400-62671400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr12:62658800-62662200 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr12:62659000-62662400 Enhancers Dnd41 blood
24 chr12:62659000-62662800 Enhancers Primary hematopoietic stem cells blood
25 chr12:62659000-62671800 Enhancers Primary T helper cells fromperipheralblood blood
26 chr12:62659200-62661600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr12:62659200-62662000 Weak transcription Duodenum Mucosa Duodenum
28 chr12:62659200-62662600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr12:62659200-62663000 Enhancers Primary B cells from cord blood blood
30 chr12:62659200-62663000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
31 chr12:62659200-62664400 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr12:62659200-62669800 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr12:62659400-62671400 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr12:62659600-62663200 Weak transcription Primary T cells fromperipheralblood blood
35 chr12:62659600-62663200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr12:62659600-62663200 Weak transcription Psoas Muscle Psoas
37 chr12:62659600-62664200 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr12:62659600-62664600 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr12:62659600-62667800 Weak transcription Left Ventricle heart
40 chr12:62659800-62662200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr12:62659800-62664600 Enhancers Primary T cells from cord blood blood
42 chr12:62660200-62663200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr12:62660200-62663600 Enhancers NHDF-Ad bronchial
44 chr12:62660600-62662000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:62660600-62662400 Enhancers Pancreatic Islets Pancreatic Islet
46 chr12:62660600-62662400 Flanking Active TSS GM12878-XiMat blood
47 chr12:62660800-62662000 Enhancers K562 blood
48 chr12:62660800-62662400 Enhancers NHLF lung
49 chr12:62660800-62662600 Enhancers Primary B cells from peripheral blood blood
50 chr12:62660800-62663600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015