The 2.0 version of rSNPBase

Variant report

Variant rs73135275
Chromosome Location chr12:62683167-62683168
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62655400-62685600 Weak transcription HSMM muscle
2 chr12:62656600-62685600 Weak transcription Aorta Aorta
3 chr12:62656600-62685600 Weak transcription Pancreas Pancrea
4 chr12:62663000-62685600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr12:62663200-62684800 Weak transcription NHEK skin
6 chr12:62663400-62685600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr12:62664400-62685400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr12:62665000-62688000 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr12:62667800-62689000 Weak transcription HSMMtube muscle
10 chr12:62669800-62688400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr12:62670000-62688600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr12:62674200-62685400 Weak transcription Muscle Satellite Cultured Cells --
13 chr12:62674400-62685600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr12:62674600-62684800 Weak transcription Primary monocytes fromperipheralblood blood
15 chr12:62674600-62685400 Weak transcription Small Intestine intestine
16 chr12:62674800-62688600 Weak transcription Brain Angular Gyrus brain
17 chr12:62676000-62685600 Weak transcription Left Ventricle heart
18 chr12:62676200-62684000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr12:62676400-62685600 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr12:62676600-62688600 Weak transcription Ovary ovary
21 chr12:62677000-62688600 Weak transcription Fetal Kidney kidney
22 chr12:62677200-62685400 Weak transcription Osteobl bone
23 chr12:62678400-62683200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr12:62679400-62683400 Weak transcription Primary B cells from peripheral blood blood
25 chr12:62679400-62685800 Weak transcription Psoas Muscle Psoas
26 chr12:62679400-62696800 Weak transcription Fetal Brain Male brain
27 chr12:62680400-62684800 Weak transcription Fetal Heart heart
28 chr12:62680400-62686000 Weak transcription Colon Smooth Muscle Colon
29 chr12:62680600-62685600 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr12:62681400-62683200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr12:62681400-62683200 Enhancers Primary T helper cells PMA-I stimulated --
32 chr12:62681400-62685400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr12:62681600-62685600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr12:62681800-62685200 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr12:62682200-62683200 Enhancers Monocytes-CD14+_RO01746 blood
36 chr12:62682400-62683200 Enhancers Primary T killer naive cells fromperipheralblood blood
37 chr12:62682400-62684400 Enhancers Dnd41 blood
38 chr12:62682400-62685000 ZNF genes & repeats Primary B cells from cord blood blood
39 chr12:62682400-62686000 ZNF genes & repeats GM12878-XiMat blood
40 chr12:62682600-62683200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
41 chr12:62682600-62683200 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr12:62682800-62683200 Enhancers Primary T helper naive cells from peripheral blood blood
43 chr12:62682800-62683200 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr12:62682800-62683200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
45 chr12:62682800-62683400 Enhancers Liver Liver
46 chr12:62682800-62688600 Weak transcription HepG2 liver
47 chr12:62683000-62683200 Enhancers Primary T helper naive cells fromperipheralblood blood
48 chr12:62683000-62683200 Active TSS K562 blood
49 chr12:62683000-62683800 Weak transcription Primary T cells from cord blood blood
50 chr12:62683000-62684000 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015