The 2.0 version of rSNPBase

Variant report

Variant rs55938311
Chromosome Location chr12:62680747-62680748
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62655400-62685600 Weak transcription HSMM muscle
2 chr12:62656600-62685600 Weak transcription Aorta Aorta
3 chr12:62656600-62685600 Weak transcription Pancreas Pancrea
4 chr12:62661600-62682800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr12:62663000-62685600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr12:62663200-62684800 Weak transcription NHEK skin
7 chr12:62663400-62685600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr12:62664400-62685400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr12:62665000-62688000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr12:62666800-62681600 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr12:62667200-62682200 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr12:62667800-62689000 Weak transcription HSMMtube muscle
13 chr12:62668400-62682000 Weak transcription NHLF lung
14 chr12:62669800-62688400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr12:62670000-62688600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr12:62674200-62685400 Weak transcription Muscle Satellite Cultured Cells --
17 chr12:62674400-62685600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr12:62674600-62684800 Weak transcription Primary monocytes fromperipheralblood blood
19 chr12:62674600-62685400 Weak transcription Small Intestine intestine
20 chr12:62674800-62688600 Weak transcription Brain Angular Gyrus brain
21 chr12:62676000-62685600 Weak transcription Left Ventricle heart
22 chr12:62676200-62684000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr12:62676400-62685600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr12:62676600-62682400 Weak transcription Dnd41 blood
25 chr12:62676600-62683000 Weak transcription Primary hematopoietic stem cells blood
26 chr12:62676600-62688600 Weak transcription Ovary ovary
27 chr12:62677000-62688600 Weak transcription Fetal Kidney kidney
28 chr12:62677200-62685400 Weak transcription Osteobl bone
29 chr12:62677400-62680800 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr12:62677400-62682800 Weak transcription Liver Liver
31 chr12:62678000-62682600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr12:62678400-62683200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr12:62678600-62681600 Strong transcription Primary B cells from cord blood blood
34 chr12:62678600-62682800 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr12:62678800-62682600 Weak transcription Primary T cells from cord blood blood
36 chr12:62679200-62681400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr12:62679400-62683400 Weak transcription Primary B cells from peripheral blood blood
38 chr12:62679400-62685800 Weak transcription Psoas Muscle Psoas
39 chr12:62679400-62696800 Weak transcription Fetal Brain Male brain
40 chr12:62679600-62681600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr12:62679600-62682400 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr12:62679600-62683000 Weak transcription Primary T cells fromperipheralblood blood
43 chr12:62680000-62682600 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr12:62680200-62680800 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr12:62680200-62680800 Weak transcription K562 blood
46 chr12:62680400-62680800 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr12:62680400-62680800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr12:62680400-62681400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr12:62680400-62681400 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr12:62680400-62681400 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015