The 2.0 version of rSNPBase

Variant report

Variant rs56126088
Chromosome Location chr12:62775933-62775934
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62717000-62777000 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr12:62717000-62783200 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr12:62717000-62784600 Weak transcription Colon Smooth Muscle Colon
4 chr12:62717200-62778400 Weak transcription Hela-S3 cervix
5 chr12:62729800-62776800 Weak transcription HSMM muscle
6 chr12:62737600-62784600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr12:62737600-62786600 Weak transcription NHLF lung
8 chr12:62737800-62780200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr12:62738200-62777000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr12:62738200-62787400 Weak transcription Spleen Spleen
11 chr12:62738200-62790600 Weak transcription Esophagus oesophagus
12 chr12:62738600-62783400 Weak transcription Muscle Satellite Cultured Cells --
13 chr12:62738800-62784000 Weak transcription Rectal Smooth Muscle rectum
14 chr12:62738800-62789600 Weak transcription Ovary ovary
15 chr12:62738800-62792800 Weak transcription Lung lung
16 chr12:62739600-62782000 Weak transcription Thymus Thymus
17 chr12:62739800-62782600 Weak transcription Fetal Intestine Small intestine
18 chr12:62741800-62783600 Weak transcription NHDF-Ad bronchial
19 chr12:62742000-62786800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr12:62747800-62777200 Weak transcription A549 lung
21 chr12:62751200-62782800 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr12:62753600-62779800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr12:62755200-62778800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr12:62757200-62782000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr12:62757600-62778400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr12:62758200-62787400 Weak transcription Fetal Muscle Leg muscle
27 chr12:62760000-62782200 Weak transcription Fetal Lung lung
28 chr12:62762400-62796600 Weak transcription Fetal Brain Male brain
29 chr12:62763000-62805400 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr12:62763200-62777000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr12:62763400-62782600 Weak transcription Fetal Brain Female brain
32 chr12:62763800-62787600 Weak transcription Brain Anterior Caudate brain
33 chr12:62764200-62782600 Weak transcription Left Ventricle heart
34 chr12:62764200-62792000 Weak transcription HepG2 liver
35 chr12:62764400-62786800 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr12:62765800-62778800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr12:62765800-62795000 Weak transcription Small Intestine intestine
38 chr12:62766200-62789200 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr12:62767000-62779800 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr12:62767200-62780800 Weak transcription Fetal Heart heart
41 chr12:62767400-62807600 Weak transcription HSMMtube muscle
42 chr12:62768000-62782000 Weak transcription Fetal Muscle Trunk muscle
43 chr12:62768400-62787600 Weak transcription Brain Hippocampus Middle brain
44 chr12:62769200-62805000 Strong transcription Primary monocytes fromperipheralblood blood
45 chr12:62769400-62776600 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr12:62769400-62777200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr12:62769400-62797400 Weak transcription Right Ventricle heart
48 chr12:62769400-62809600 Weak transcription Stomach Mucosa stomach
49 chr12:62769600-62777000 Weak transcription Primary T cells from cord blood blood
50 chr12:62769600-62777200 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015