Variant report

Variant	rs10756867
Chromosome Location	chr9:17325704-17325705
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 282 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:269)

rs_ID	r²[population]
rs10046851	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10114083	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10114662	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs10114688	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10114730	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10116093	0.92[CEU][hapmap];0.90[EUR][1000 genomes]
rs10116140	0.90[EUR][1000 genomes]
rs10116428	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10119297	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10119370	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10120757	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10121841	1.00[CEU][hapmap];0.91[TSI][hapmap];0.91[EUR][1000 genomes]
rs10122987	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10123109	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs10123715	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10123745	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10124487	1.00[CEU][hapmap];0.93[TSI][hapmap];0.95[EUR][1000 genomes]
rs10124513	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10125333	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1023778	0.88[JPT][hapmap]
rs10283690	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs10481559	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10511633	0.82[JPT][hapmap]
rs10738474	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10738476	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10756860	0.89[EUR][1000 genomes]
rs10756866	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10756868	0.81[TSI][hapmap]
rs10756869	1.00[CEU][hapmap];0.93[TSI][hapmap];0.95[EUR][1000 genomes]
rs10756874	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10756875	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10756876	0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10756877	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10756878	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10810740	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10810748	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10810749	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10810750	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10810751	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10810752	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10810754	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10810756	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10810760	0.81[TSI][hapmap]
rs10810761	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10810763	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10810764	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10810765	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10810770	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10810773	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10810774	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10810775	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10810777	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10810781	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs10962922	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs10962924	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs10962939	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs10962947	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10962950	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10962982	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10962988	0.82[CEU][hapmap];0.81[TSI][hapmap]
rs10963026	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10963027	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10963034	0.81[TSI][hapmap]
rs10963042	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10963057	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10963063	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs1113379	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs1113380	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs12236820	0.82[EUR][1000 genomes]
rs12337154	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12337171	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12342180	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12345267	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs12379102	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12379104	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1318162	0.83[CHB][hapmap];0.88[JPT][hapmap]
rs13290922	0.84[EUR][1000 genomes]
rs1372702	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1413418	0.82[JPT][hapmap]
rs1413419	0.82[JPT][hapmap]
rs1442516	0.88[CEU][hapmap]
rs1442523	0.90[EUR][1000 genomes]
rs1442524	0.96[CEU][hapmap];0.89[EUR][1000 genomes]
rs1442528	0.81[TSI][hapmap]
rs1442533	0.92[CEU][hapmap];0.83[EUR][1000 genomes]
rs1576958	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs1576962	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1582029	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs1582031	0.82[CEU][hapmap]
rs1583987	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1591138	0.82[CEU][hapmap];0.89[YRI][hapmap]
rs1596193	1.00[CEU][hapmap];0.91[TSI][hapmap];0.93[EUR][1000 genomes]
rs1759452	0.82[JPT][hapmap]
rs1759453	0.82[JPT][hapmap]
rs1759454	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1759457	0.81[JPT][hapmap]
rs1759458	0.82[JPT][hapmap]
rs1759459	0.82[JPT][hapmap]
rs1759460	0.82[JPT][hapmap]
rs1759462	0.82[JPT][hapmap]
rs1759463	0.82[JPT][hapmap]
rs1759464	0.81[CHB][hapmap];0.87[JPT][hapmap]
rs1759465	0.81[JPT][hapmap]
rs1759613	0.87[EUR][1000 genomes]
rs1759616	0.82[JPT][hapmap]
rs1889114	0.82[CEU][hapmap]
rs1930639	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs1930641	0.82[JPT][hapmap]
rs1953105	0.82[CEU][hapmap]
rs2039413	0.84[CHB][hapmap]
rs2044119	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.98[TSI][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2044120	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2099858	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2151290	0.92[CEU][hapmap];0.82[EUR][1000 genomes]
rs2225598	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2584535	0.82[CEU][hapmap]
rs2584547	0.82[CEU][hapmap]
rs2584554	0.82[CEU][hapmap]
rs2593387	0.89[EUR][1000 genomes]
rs2593412	0.82[CEU][hapmap]
rs2593414	0.82[CEU][hapmap]
rs2774622	0.84[CHB][hapmap]
rs2774623	0.82[JPT][hapmap]
rs2779763	0.84[CHB][hapmap]
rs2779773	1.00[CEU][hapmap];0.93[TSI][hapmap];0.88[EUR][1000 genomes]
rs2779775	1.00[CEU][hapmap];0.93[TSI][hapmap];0.84[EUR][1000 genomes]
rs2779776	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2780197	0.82[CEU][hapmap]
rs2780198	0.82[CEU][hapmap]
rs2780199	0.82[CEU][hapmap]
rs2780204	0.82[JPT][hapmap]
rs2780205	0.82[JPT][hapmap]
rs2780206	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2815173	0.82[JPT][hapmap]
rs2815182	0.81[JPT][hapmap]
rs2990670	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3119848	0.82[JPT][hapmap]
rs3122360	0.84[CHB][hapmap]
rs34105027	0.89[EUR][1000 genomes]
rs36057268	0.93[EUR][1000 genomes]
rs3765040	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3780258	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3808784	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3808785	0.82[JPT][hapmap]
rs3814137	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs3814139	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs3824391	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3824392	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3861711	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4128606	0.89[CHB][hapmap]
rs4147023	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs4246135	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4246136	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4272484	1.00[CEU][hapmap];0.95[TSI][hapmap];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4409489	0.87[EUR][1000 genomes]
rs4424358	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4563978	0.96[EUR][1000 genomes]
rs4621917	0.82[JPT][hapmap]
rs4961437	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4961439	0.90[EUR][1000 genomes]
rs4961534	0.82[JPT][hapmap]
rs4961539	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4961540	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4961541	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4961542	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4961543	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4961544	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4961545	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4961547	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4961548	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4961551	0.82[JPT][hapmap]
rs4961552	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4961553	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4961554	0.82[JPT][hapmap]
rs4961555	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs4961557	0.92[CEU][hapmap];0.89[TSI][hapmap];0.89[EUR][1000 genomes]
rs585682	0.81[JPT][hapmap]
rs593614	0.89[EUR][1000 genomes]
rs595894	0.87[EUR][1000 genomes]
rs600041	0.82[JPT][hapmap]
rs600133	0.82[JPT][hapmap]
rs605916	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs613966	0.82[JPT][hapmap]
rs614412	0.82[JPT][hapmap]
rs614471	0.82[JPT][hapmap]
rs619380	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs632176	0.82[JPT][hapmap]
rs632265	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs634383	0.82[JPT][hapmap]
rs634446	0.82[JPT][hapmap]
rs642582	0.82[JPT][hapmap]
rs645117	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs646025	0.82[JPT][hapmap]
rs647013	0.82[JPT][hapmap]
rs6475122	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs6475125	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs6475129	0.82[JPT][hapmap]
rs6475137	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6475139	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6475141	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.98[TSI][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6475142	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6475143	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.82[MEX][hapmap];0.98[TSI][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6475144	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.98[TSI][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6475145	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6475147	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs654521	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.98[TSI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs664447	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs670058	0.89[EUR][1000 genomes]
rs670511	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs673587	0.82[JPT][hapmap]
rs679666	0.81[JPT][hapmap]
rs7018705	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7020918	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs7022024	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7022060	1.00[CEU][hapmap];0.93[TSI][hapmap];0.94[EUR][1000 genomes]
rs7027539	0.82[JPT][hapmap]
rs7028593	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7028779	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7028930	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7030452	0.83[EUR][1000 genomes]
rs7031133	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7033974	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7034768	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs7035525	0.84[CHB][hapmap];0.81[JPT][hapmap]
rs7037111	0.94[EUR][1000 genomes]
rs7038064	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7038186	0.82[CEU][hapmap]
rs7038197	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7041840	1.00[CEU][hapmap];0.89[TSI][hapmap];0.89[EUR][1000 genomes]
rs7042700	0.82[JPT][hapmap]
rs7043703	0.84[CHB][hapmap]
rs7044462	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7044823	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7046327	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs7046933	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7047093	0.82[JPT][hapmap]
rs753393	0.81[CEU][hapmap]
rs7848397	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.95[TSI][hapmap];0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7848980	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7849084	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7849085	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7851890	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7854724	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7854802	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7854818	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7858530	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7862069	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.98[TSI][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7864270	0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7864271	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7864296	0.82[JPT][hapmap]
rs7864650	0.87[EUR][1000 genomes]
rs7864919	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7865766	0.94[EUR][1000 genomes]
rs7865807	0.82[JPT][hapmap]
rs7868684	0.91[EUR][1000 genomes]
rs7868700	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7869727	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7870101	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7871926	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7872831	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7873708	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7874453	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs870270	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs870271	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs9298772	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9298773	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9298774	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9406666	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9695844	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024799	chr9:16631890-17431827	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	esv2764141	chr9:16903446-17351711	Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv892658	chr9:17041557-17532840	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
4	nsv892661	chr9:17134245-17532840	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
5	nsv613693	chr9:17147191-17710407	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
6	nsv471287	chr9:17165698-17708814	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
7	nsv466269	chr9:17165698-17710407	Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
8	nsv892662	chr9:17168867-17329964	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
9	nsv466270	chr9:17236376-17377629	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
10	nsv613694	chr9:17236376-17377629	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
11	nsv892663	chr9:17243746-17329964	ZNF genes & repeats Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
12	nsv892665	chr9:17250170-17371690	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
13	nsv613695	chr9:17273731-17348412	Strong transcription Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs10756867	CNTLN	cis	parietal	SCAN
rs10756867	CNTLN	cis	cerebellum	SCAN

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:17262800-17339800	Weak transcription	Left Ventricle	heart
2	chr9:17284400-17344800	Weak transcription	Primary hematopoietic stem cells	blood
3	chr9:17292200-17367200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr9:17294000-17334000	Weak transcription	Fetal Stomach	stomach
5	chr9:17294000-17346000	Weak transcription	Fetal Muscle Leg	muscle
6	chr9:17301200-17332200	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr9:17313400-17333200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr9:17315400-17347400	Weak transcription	Colon Smooth Muscle	Colon
9	chr9:17315400-17349800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr9:17318000-17327800	Weak transcription	Liver	Liver
11	chr9:17318400-17334000	Weak transcription	Primary monocytes fromperipheralblood	blood
12	chr9:17319000-17349800	Weak transcription	Osteobl	bone
13	chr9:17319400-17349800	Weak transcription	NH-A	brain
14	chr9:17320600-17333800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr9:17321600-17331600	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr9:17321600-17331600	Weak transcription	HUES64 Cell Line	embryonic stem cell
17	chr9:17321600-17334600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr9:17321800-17340800	Weak transcription	HUVEC	blood vessel
19	chr9:17321800-17342800	Weak transcription	Pancreas	Pancrea
20	chr9:17323600-17328200	Weak transcription	Fetal Lung	lung
21	chr9:17323600-17342800	Weak transcription	Aorta	Aorta
22	chr9:17325600-17325800	Enhancers	iPS-15b Cell Line	embryonic stem cell

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