Variant report

Variant	rs10764633
Chromosome Location	chr10:26845653-26845654
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:26624036..26626076-chr10:26845372..26847164,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10829019	0.82[CEU][hapmap];0.89[JPT][hapmap];0.84[YRI][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10829020	0.87[ASN][1000 genomes]
rs10829024	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11015154	0.82[CEU][hapmap];0.89[JPT][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11015155	0.89[JPT][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11015156	0.82[CEU][hapmap];0.89[JPT][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11015160	1.00[CEU][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11015161	0.83[CEU][hapmap]
rs11015162	0.95[ASN][1000 genomes]
rs11015163	0.95[ASN][1000 genomes]
rs11015175	1.00[CEU][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11597181	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12354674	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12355051	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12357356	0.88[JPT][hapmap];0.87[ASN][1000 genomes]
rs67278705	0.95[ASN][1000 genomes]
rs7081291	1.00[CEU][hapmap];0.90[JPT][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7096433	0.82[CEU][hapmap]
rs7096704	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899859	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7903201	0.82[CEU][hapmap];0.89[JPT][hapmap];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7910019	1.00[CEU][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894975	chr10:26343356-27014467	Strong transcription Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:73 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26802200-26853400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr10:26834800-26858400	Strong transcription	Dnd41	blood
3	chr10:26839200-26847000	Strong transcription	Primary T helper cells PMA-I stimulated	--
4	chr10:26839400-26854200	Strong transcription	Primary T cells from cord blood	blood
5	chr10:26839600-26860800	Strong transcription	Primary T cells fromperipheralblood	blood
6	chr10:26839800-26861200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
7	chr10:26840000-26850600	Weak transcription	Rectal Mucosa Donor 29	rectum
8	chr10:26840000-26860000	Strong transcription	Primary B cells from peripheral blood	blood
9	chr10:26840200-26855200	Weak transcription	Placenta	Placenta
10	chr10:26840200-26863200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr10:26840400-26849000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr10:26841800-26846000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
13	chr10:26843200-26846400	Genic enhancers	Fetal Thymus	thymus
14	chr10:26843200-26849000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
15	chr10:26843200-26849000	Weak transcription	Spleen	Spleen
16	chr10:26843200-26849600	Weak transcription	Lung	lung
17	chr10:26843400-26846000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
18	chr10:26844200-26846200	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr10:26844200-26846200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
20	chr10:26844200-26847000	Enhancers	Liver	Liver
21	chr10:26844400-26845800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr10:26844400-26846000	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr10:26844400-26846000	Enhancers	Fetal Intestine Large	intestine
24	chr10:26844400-26846000	Enhancers	Fetal Intestine Small	intestine
25	chr10:26844400-26846200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr10:26844400-26846200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr10:26844400-26846200	Enhancers	A549	lung
28	chr10:26844400-26846600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr10:26844600-26845800	Enhancers	Fetal Lung	lung
30	chr10:26844600-26846200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr10:26844600-26846200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr10:26844600-26846200	Enhancers	Osteobl	bone
33	chr10:26844600-26846600	Enhancers	ES-I3 Cell Line	embryonic stem cell
34	chr10:26844600-26846600	Enhancers	iPS-15b Cell Line	embryonic stem cell
35	chr10:26844600-26846800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
36	chr10:26844600-26847000	Enhancers	Adipose Nuclei	Adipose
37	chr10:26844600-26849000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
38	chr10:26844800-26845800	Weak transcription	Right Atrium	heart
39	chr10:26844800-26847000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr10:26845000-26845800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
41	chr10:26845000-26845800	Enhancers	H1 Cell Line	embryonic stem cell
42	chr10:26845000-26845800	Enhancers	HepG2	liver
43	chr10:26845000-26846000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
44	chr10:26845000-26846200	Enhancers	HUES6 Cell Line	embryonic stem cell
45	chr10:26845000-26846200	Enhancers	iPS-18 Cell Line	embryonic stem cell
46	chr10:26845000-26846400	Weak transcription	Primary hematopoietic stem cells	blood
47	chr10:26845000-26846600	Enhancers	Cortex derived primary cultured neurospheres	brain
48	chr10:26845000-26846800	Enhancers	HUES64 Cell Line	embryonic stem cell
49	chr10:26845000-26855600	Weak transcription	Esophagus	oesophagus
50	chr10:26845200-26846000	Enhancers	iPS-20b Cell Line	embryonic stem cell

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