Variant report

Variant	rs10766418
Chromosome Location	chr11:17704234-17704235
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:17701946..17705746-chr11:17707792..17711044,3	K562	blood:
2	chr11:17674426..17676272-chr11:17704010..17706690,2	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10741731	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10766419	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10766421	0.92[EUR][1000 genomes]
rs10832837	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10832841	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10832844	0.93[EUR][1000 genomes]
rs11024364	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11024367	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11024368	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11024375	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11605964	0.89[EUR][1000 genomes]
rs12785437	0.86[ASN][1000 genomes]
rs16934571	0.86[ASN][1000 genomes]
rs2526551	0.80[EUR][1000 genomes]
rs28683112	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2878806	0.86[ASN][1000 genomes]
rs2878807	0.86[ASN][1000 genomes]
rs3858499	0.86[ASN][1000 genomes]
rs3858501	0.86[ASN][1000 genomes]
rs3858502	0.86[ASN][1000 genomes]
rs3901370	0.86[ASN][1000 genomes]
rs3935159	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4081578	0.88[EUR][1000 genomes]
rs4141260	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4141261	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4141262	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4756905	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4756907	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4757565	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4757567	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4757568	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4757569	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7395942	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7483014	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9633896	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040065	chr11:17556031-17753467	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv1044126	chr11:17557715-17730646	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv540953	chr11:17557715-17730646	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17704000-17704800	Enhancers	Hela-S3	cervix
2	chr11:17704000-17705000	Enhancers	HSMM	muscle
3	chr11:17704000-17711600	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr11:17704200-17704400	Bivalent Enhancer	Fetal Muscle Leg	muscle
5	chr11:17704200-17704400	Enhancers	Psoas Muscle	Psoas
6	chr11:17704200-17705000	Enhancers	Muscle Satellite Cultured Cells	--
7	chr11:17704200-17705600	Enhancers	HUVEC	blood vessel
8	chr11:17704200-17711600	Enhancers	Skeletal Muscle Female	skeletal muscle

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