Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10773040	0.80[ASN][1000 genomes]
rs10773043	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs10846563	0.99[ASN][1000 genomes]
rs10846565	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10846566	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs10846568	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11057374	0.99[ASN][1000 genomes]
rs11057375	0.99[ASN][1000 genomes]
rs11057378	0.93[ASN][1000 genomes]
rs11057385	0.87[ASN][1000 genomes]
rs12228611	0.96[ASN][1000 genomes]
rs1882488	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1922257	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7138100	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7300162	0.95[ASN][1000 genomes]
rs7314963	0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7959043	0.96[ASN][1000 genomes]
rs7960854	0.91[ASN][1000 genomes]
rs7961179	0.91[ASN][1000 genomes]
rs7962016	0.96[ASN][1000 genomes]
rs7980570	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498024	chr12:123994372-124459856	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:124331400-124352800	Weak transcription	Fetal Brain Female	brain

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