Variant report

Variant	rs10779602
Chromosome Location	chr1:213557793-213557794
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10779600	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11586612	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1187770	0.84[EUR][1000 genomes]
rs1187772	0.83[EUR][1000 genomes]
rs1187773	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1187780	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1187781	1.00[ASN][1000 genomes]
rs1187782	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1202681	0.86[EUR][1000 genomes]
rs2033596	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3010232	0.91[EUR][1000 genomes]
rs3010233	0.94[EUR][1000 genomes]
rs4655260	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655359	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs753369	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:213555400-213567000	Weak transcription	Right Atrium	heart
2	chr1:213555800-213561000	Weak transcription	Fetal Lung	lung
3	chr1:213556200-213558000	Weak transcription	HepG2	liver
4	chr1:213556200-213561600	Weak transcription	Left Ventricle	heart
5	chr1:213556400-213558000	Weak transcription	Fetal Heart	heart
6	chr1:213556800-213561600	Weak transcription	Fetal Muscle Trunk	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links